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Endocrinology Vol. 138, No. 12 5308-5315
Copyright © 1997 by The Endocrine Society


ARTICLES

Dominant Negative Activity of Mutant Thyroid Hormone {alpha}1 Receptors from Patients with Hepatocellular Carcinoma1

Kwang-huei Lin, Xu-Guang Zhu, Hai-Chu Hsu, Shen-Liang Chen, Hsing-ying Shieh, Szu-Tah Chen, Peter McPhie and Sheue-yann Cheng

Department of Biochemistry, Chang-Gung College of Medicine and Technology, Taoyuan, Taiwan; and Gene Regulation Section, Laboratory of Molecular Biology, National Cancer Institute and Laboratory of Biochemical Pharmacology (P.M.), National Institute of Diabetes and Digestive and Kidney Diseases (X.-G.Z., S.-y.C.), Bethesda, Maryland 20892

Address all correspondence and requests for reprints to: Dr. Kwang-huei Lin, Department of Biochemistry, Chang-Gung College of Medicine and Technology, Taoyuan, Taiwan.


    Abstract
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Complementary DNAs for two mutant thyroid hormone {alpha}1 receptors (TR{alpha}1) were isolated from hepatocellular carcinomas of two patients. Sequence analyses of the complementary DNAs showed a single Val390Ala and double Pro398Ser/Glu350Lys mutations in mutants H and L, respectively. We characterized their hormone-binding, DNA-binding, and dominant negative activities. Mutants H and L did not bind the hormone T3. Their DNA-binding activities were analyzed using three types of thyroid hormone response elements (TREs) in which the half-site binding motifs are arranged in an everted repeat (Lys), an inverted repeat (Pal), or a direct repeat separated by four nucleotides (DR4). Compared with wild-type TR{alpha}1 (w-TR{alpha}1), which bound these TREs with different homodimer/monomer ratios, binding of mutant L to the three TREs as homodimers was reduced by ~90%. However, binding of mutant H to these TREs was more complex. Although it bound normally to DR4 as homodimers, its binding to Lys as homodimers was reduced by ~80%. Surprisingly, its binding to Pal was markedly enhanced compared with w-TR{alpha}1. The binding of these two mutants to the three TREs as heterodimers with retinoid X receptors (RXR{alpha} and -ß) was not significantly affected. Consistent with the lack of T3-binding activity, both mutants had lost their trans-activation capacity. Mutants H and L exhibited dominant negative activity, but differed in their TRE dependency. The dominant negative potency of mutant H was in the rank order of Pal > DR4 > Lys, whereas no TRE dependency was observed for mutant L. The present study indicates that mutations of the TR{alpha} gene do occur in patients and that these novel TR{alpha}1 mutants provide a valuable tool to further understand the molecular basis of the dominant negative action of mutant TRs.


    Introduction
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
THYROID hormones regulate growth, development, and differentiation. Their actions are mediated by the thyroid hormone nuclear receptors (TRs) (1). TRs are derived from two genes, TR{alpha} and TRß, which are located on chromosomes 17 and 3, respectively (2). Each gene gives rise to two isoforms of receptors, {alpha}1 and {alpha}2, and ß1 and ß2, due to alternative splicing of the primary transcripts (2). The gene-regulating activity of TRs is mediated by binding to specific DNA sequences, known as thyroid hormone response elements (TREs), located on the promoter regions of thyroid hormone target genes. The transcriptional activity of TRs is not only dependent on the thyroid hormone, T3, but also on the type of TREs. Recent studies have indicated that the transcriptional activity of TRs is further modulated via interaction with four groups of cellular proteins: 1) members of the nuclear receptor superfamily, notably retinoid X receptors (1, 2); 2) corepressors, including p270/N-CoR (3), SMRT (4), TRUP (5), SHP (6), and TRACs (7); 3) coactivator, SRC-1 (8); and 4) the tumor suppressor p53 (9).

Resistance to thyroid hormone (RTH) is a genetic disease characterized by an inappropriately normal or elevated level of TSH and elevated levels of circulating thyroid hormones. Clinical features include attention deficit hyperactivity disorder, decreased IQ, dyslexia, short stature, decreased weight, tachycardia, and cardiac disease (10, 11, 12). These features have been attributed to mutations in the TRß gene (10, 11). TRß1 mutants derived from RTH patients have reduced T3 binding affinities and transcriptional capacities and, unlike other nuclear receptor mutations causing hormone resistance syndromes, act in a dominant negative fashion to cause the clinical phenotype (10, 11, 13).

For reasons that are not clear, no TR{alpha} mutants have ever been identified in RTH patients. It has been postulated that mutations in the TR{alpha} gene could occur; however, they escape detection due to the possibilities that the mutation is inconsequential, lethal, or may not be associated with the abnormalities observed for RTH. Recently, we have cloned and characterized a naturally occurring TR{alpha} mutant, J7-TR{alpha}1, from a human hepatocellular carcinoma cell line (14). J7-TR{alpha}1 has a single Met259Ile mutation that abolishes T3-binding activity. However, it binds to the three TREs as homodimer, and it heterodimerizes equally well as the w-TR{alpha}1 with the retinoid X receptor ß (RXRß). Furthermore, it has strong dominant negative action on wild-type TRs on all three TREs (14). These findings indicate that mutation of the TR{alpha} gene could occur naturally and could abrogate the functions of TRs via a dominant negative effect. Therefore, it is reasonable to postulate that mutations of the TR{alpha} gene could lead to other abnormalities not exclusively associated with RTH. To test this possibility, we cloned TR{alpha} genes from the hepatocellular carcinomas of two patients. We identified two mutants that had lost T3-binding activity and had unusual TRE binding characteristics. These two mutants had strong dominant negative activity, suggesting that mutations of the TR{alpha} gene could be associated with abnormalities other than RTH.


    Materials and Methods
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Reagents
[{alpha}-32P]Deoxy (d)-CTP (3000 Ci/mmol) and L-[35S]methionine (10 mCi/ml) were obtained from Amersham International (Aylesbury, UK). [125I]T3 (2206 Ci/mmol; 1 Ci = 37 gigabecquerels) was obtained from DuPont-New England Nuclear (Boston, MA). Super reverse transcriptase and human placental ribonuclease (RNase) inhibitor were purchased from HT Biotechnology (Cambridge, UK). pcDNA3, a eukaryotic expression vector, and Lipofectamine were purchased from Invitrogen (San Diego, CA) and Life Technologies (Gaithersburg, MD), respectively. Taq DNA polymerase, dNTPs, pGEM-T Vector Systems, and TNT Coupled Reticulocyte Systems were obtained from Promega (Madison, WI). Restriction enzymes were obtained from New England Biolabs (Beverly, MA).

Tumor samples
Surgically removed liver tumors were obtained from patients H and L of Chang-Gung Memorial Hospital (Taipei, Taiwan). Male patients H and L had grade II-III hepatocellular carcinoma, and all tested positive for the hepatitis B viral surface antigen. The status of the tumor suppressor p53 in these patients was unknown. Thyroid function tests (total T3, total T4, and TSH) were normal, and no other symptoms of RTH were observed. Normal adjacent hepatic tissues were also obtained as controls.

Cloning of thyroid hormone receptors from tumor cells
Total RNA was prepared from tissues by the guanidinium thiocyanate method (15). Reverse transcription of RNA followed by PCR were carried out similarly as described by Cook et al. (16). The complementary DNAs (cDNAs) obtained were used as templates for PCR, which was carried out in 10 mM Tris-HCl (pH 8.3), 50 mM KCl, 1.5 mM MgCl2, and 0.1 mM dNTP with isoform-specific 5'- and 3'-primers and Taq polymerase (0.5 µl; 2.5 U/µl). The amplified cDNAs were purified and ligated onto pGEM-T vectors (Promega). The coding sequences of the TR{alpha}1 in these plasmids were verified by restriction enzyme mapping, Southern blot analysis, and DNA sequencing. The cDNAs for the hepatocellular carcinoma-derived TR{alpha}1s were further subcloned into pcDNA3 (Invitrogen) for in vitro transcription/translation of TR{alpha}1 proteins. Their cDNAs were also subcloned into mammalian expression vectors as described previously (14).

Detection of mutations in the TR{alpha} gene
We used the nonisotopic RNase cleavage assay kit (Ambion, Houston, TX) to screen for point mutations as first described by Myers et al. (17). Briefly, the cDNAs encoding mutant TR{alpha}1s and the wild-type TR{alpha}1 isolated from normal human liver (w-TR{alpha}1) were amplified by PCR using T7 or SP6 promoter-containing primers. After amplification, 2 µl PCR products were used as templates for in vitro transcription of sense and antisense strands of RNA, using T7 and Sp6 polymerase, respectively. An equal volume (5 µl) of sense and antisense RNAs from hepatocellular carcinoma-TR{alpha}1 or w-TR{alpha}1 was hybridized with the RNAs derived from the same templates or with the other templates at room temperature for 1 h. Four microliters of hybridized RNAs were digested with RNase at 30 C for 30 min. The digested products were run on a 2% agarose gel and visualized with ethidium bromide staining under UV light.

Sequencing of cDNAs encoding TR{alpha}1
The plasmids containing the cDNAs encoding TR{alpha}1 were purified using the Qiagen Maxi Kit (Qiagen, Chatsworth, CA). Both strands of the coding sequence were sequenced. The sequencing of cDNA was carried out using the Applied Biosystems model 373A automatic DNA sequencer according to the manufacturer’s instructions (Applied Biosystems, Foster City, CA). Briefly, the reaction mixture consisted of 4 µl 0.8 pmol/µl primer, which expanded the entire coding sequence (see below), 4 µl 0.25 µg/µl plasmid DNA, and 9.5 µl dideoxy mixture. The primer sequences used were described previously (14).

The PCR cycle was 96 C for 15 sec, 50 C for 5 sec, and 60 C for 4 min for a total of 25 cycles. The reaction mixture was purified on a CentriSep spin column (Princeton Separations, Adelphia, NJ) and dried. The mixture was redissolved in 4 µl of solution containing formamide and 50 mM EDTA in a ratio of 4:1, denatured at 90 C for 2 min, and applied to a 4.5% denatured gel.

Electrophoresis mobility shift assay (EMSA)
32P-Labeled Lys, DR4, or Pal were prepared as previously described (18). TR proteins were synthesized by in vitro transcription/translation using the TNT-coupled reticulocyte kit according to the manufacturer’s instructions (Promega). The synthesized TR proteins were quantified by measuring the intensity of the 35S-labeled protein bands after SDS-PAGE. For EMSA, identical amounts of TRs were incubated with the 32P-labeled TRE in the presence or absence of RXR{alpha} or RXRß. After electrophoresis, TR{alpha}1 homodimers and heterodimers were visualized by autoradiography and quantified by a PhosphorImager (Molecular Dynamics, Sunnyvale, CA).

Binding of [3'-125I]T3 to TRs
Five microliters of the lysates containing the in vitro translated TR proteins were incubated with 0.2 nM [3'-125I]T3 in the presence of increasing concentrations of unlabeled T3. The TR-bound [3'-125I]T3 was separated from free [3'-125I]T3 as described by Lin et al. (19). The binding data were analyzed using Eq I based on direct competition between [125I]T3 and the unlabeled T3 for a single site on the receptor. The concentration of radioactive complex is given by the equation: [R] = {([R]o + [h])/(Kd + [h] + [c]} (Eq I), where [R]o is the total concentration of receptor, [h] and [c] are the concentrations of [125I]T3 and unlabeled T3, respectively, and Kd is the dissociation constant of the hormone-receptor complex. The data were fitted directly to Eq I using the PC-MLAB program (Civilized Software, Bethesda, MD) to evaluate Kd and [R]o. The fitted curves are shown in Fig. 4Go.



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Figure 4. Binding of [125I]T3 to the wild-type and mutant TR{alpha}1. An equal amount of the in vitro translated TR{alpha}1 was incubated with 0.2 nM [125I]T3 in the absence or presence of the indicated unlabeled T3 concentrations. The free and bound [125I]T3 were separated as described in Materials and Methods. Data are expressed as a percentage of the [125I]T3 bound in the absence of unlabeled T3. The curves were fitted to the data using Eq I as shown in Materials and Methods. {circ}, w-TR{alpha}1; •, mutant L; {triangleup}, mutant H; {blacktriangleup}, J7-TR{alpha}1.

 
Determination of the transcriptional activity of TRs
To determine the T3-dependent transcriptional activity, mammalian expression plasmids of mutant and/or the wild-type TR{alpha}1 and the TRE-containing luciferase reporter genes were transfected into COS-1 cells with or without T3 by the Lipofectamine method according to the manufacturer’s instructions (Life Technologies, Grand Island, NY)). After 24 h, the cells were harvested and lysed, and 20 µl were assayed for luciferase activity (14). The transfection efficiency was normalized to the protein concentration of the lysates.

Western blotting
Cell lysates (30 µg) from transient transfection experiments, as described above, were loaded onto a 10% SDS-PAGE gel. After electrophoresis, proteins were transferred onto a nitrocellulose membrane (PH79 membrane, Schleicher and Schuell, Keene, NH). The membrane was gently shaken in 5% nonfat milk in Tris-buffered saline (25 mM Tris, pH 7.4, and 150 mM NaCl) for 20 h and subsequently washed three times with Tris-buffered saline. The membrane was incubated with monoclonal antibody C4 (2 µg/ml) (20) for 1 h. After washing, the membrane was incubated with affinity-purified rabbit antimouse Ig conjugated with horseradish peroxidase (1:250 dilution). TR protein bands were visualized by chemiluminescence using the ECL kit (Amersham Life Science, Arlington Heights, IL).


    Results
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
Cloning of TR{alpha}1 mutants from patients with hepatocellular carcinoma
Previously, we have identified mutations in the TR{alpha} gene in cultured cell lines derived from hepatocellular carcinomas of patients (14). To characterize TRs directly in tumor tissues, we cloned cDNAs encoding TR{alpha}1 from the hepatocellular carcinomas of two patients (TR{alpha}1-H and TR{alpha}1-L) who had been diagnosed with grade II–III hepatocellular carcinoma. As a control, w-TR{alpha}1 was similarly cloned from normal human liver. To determine whether their TR{alpha} genes had mutations, the mismatch point mutation detection analysis was used. As a control, the hybridized sense and antisense RNAs of w-TR{alpha}1 were not treated (lane 2 of Fig. 1Go) or were treated with RNase (lane 3 of Fig. 1Go). As expected, one RNA band with the same size and similar intensity was detected in both conditions, confirming a perfect complementarity between the two RNAs. However, when the sense w-TR{alpha}1 RNA was hybridized with antisense TR{alpha}1-H (lane 4) or antisense TR{alpha}1-L (lane 7) and treated with RNase, several degraded fragments with smaller sizes were detected. Degraded fragments were also seen when the antisense w-TR{alpha}1 RNA was hybridized with the sense TR{alpha}1-H (lane 5) or sense TR{alpha}1-L (lane 8) and treated with RNase. This was in contrast to that shown in lanes 6 and 9, in which one major band with minor background bands were detected when the sense and anitsense RNAs of TR{alpha}1-H or TR{alpha}1-L, respectively, were hybridized and treated with RNase. These results indicate that the two TR{alpha}1s cloned from liver tumors of patients had mutations in the TR{alpha} gene. Because we did not detect mutant TR{alpha}1 in adjacent normal hepatic tissues or in biopsy sample of normal liver tissue, these mutations most likely are somatic events of hepatocellular carcinomas.



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Figure 1. Detection of point mutation in mutants H and L by mismatch RNA analysis. The sense and antisense RNAs were prepared, hybridized, and digested by RNase as described in Materials and Methods. Lane 1, Size markers; lane 2, sense w-TR{alpha}1 RNA was hybridized with its antisense counterpart; lane 3, same as in lane 2 but with RNase digestion; lanes 4 and 7, sense w-TR{alpha}1-RNA was hybridized with antisense RNA from mutant H or L, respectively, and digested with RNase; lanes 5 and 8, antisense w-TR{alpha}1 RNA was hybridized with sense RNA from mutant H or L and digested with RNase; lanes 6 and 9, sense and antisense RNA from mutant H or L, respectively, digested with RNase.

 
To identify the sites of mutation, both strands of the cDNAs for TR{alpha}1-H and TR{alpha}1-L were sequenced. w-TR{alpha}1 cloned from normal human liver was also sequenced as a positive control. TR{alpha}1-H had a point mutation at nucleotide position 1241 from T to C, resulting in changing of Val (GTC) to Ala (GCC) at codon 390 (see Fig. 2Go). TR{alpha}1-L had two mutations at nucleotide positions 1120 (G to A) and 1264 (C to T), resulting in changing of Glu (GAG) to Lys (AAG) and of Pro (CCC) to Ser (TCC) at codons 350 and 398, respectively (Fig. 2Go). It was of great interest to note that the mutation sites for mutants H (V390A) and L (P398S) were located in the corresponding region of "hot spot 2" of TRß1 (10, 21).



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Figure 2. Schematic representation of the locations of mutation sites of the two TR{alpha}1 mutants from patients with hepatocellular carcinoma. The mutation sites were identified by direct DNA sequencing as described in Materials and Methods. The mutation sites are marked. w-TRß1 was included to indicate the location of two hot spots (10, 20).

 
Hormone- and DNA-binding activities of TR{alpha}1 mutants were impaired
The mutant receptor proteins were prepared by in vitro transcription/translation. Figure 3AGo shows that the size and intensity of mutant proteins were similar to those of w-TR{alpha}1. The translated wild-type (lane 1 of Fig. 3AGo) and mutant TR{alpha}1s (lanes 2–3) show a full-length receptor with an apparent molecular mass of 49 kDa and three other truncated proteins, most likely due to initiations from the downstream ATG (22). In addition, Fig. 3BGo shows that both mutants H and L were immunoprecipitated by the anti-TR monoclonal antibody C4 (mAb C4; lanes 2 and 3, respectively) in a manner similar to that of w-TR{alpha}1 (lane 1 of Fig. 3BGo) (20). Taken together, these results indicate that the mutant proteins were correctly translated.



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Figure 3. A, The molecular size of the wild-type and mutant TR{alpha}1 prepared by in vitro transcription/translation. Five microliters of the in vitro transcription/translation lysates were analyzed by 10% SDS-PAGE, and the dry gel was autoradiographed. Lane 1, Wild-type TR{alpha}1; lane 2, mutant H; lane 3, mutant L. B, Immunoreactivity of the wild-type and mutant TR{alpha}1. Five microliters of the in vitro transcription/translation lysates were analyzed by 10% SDS-PAGE, followed by transferring onto a nitrocellulose membrane as described in Materials and Methods. The protein bands were visualized by chemiluminescence using the ECL kit. Lane 1, w-TR{alpha}1; lane 2, mutant H; lane 3, mutant L.

 
To determine the hormone-binding activity, equal amounts of wild-type and mutant TR{alpha}1 were used for binding to [125I]T3. Figure 4Go shows the competitive binding displacement curves. The data for mutant J7-TR{alpha}1 (14) were also included as a control. Analysis of the binding data indicates that w-TR{alpha}1 bound to T3 similarly to that shown previously (Kd = 0.056 ± 0.023 nM) (14). In contrast, mutants H and L had lost T3-binding activity, similar to that seen for the mutant J7-TR{alpha}1 (14).

The DNA-binding activity of mutants was characterized by EMSA using three TREs: Lys, DR4, and Pal. As a control, lanes 1 of Fig. 5Go, A–C, show that w-TR{alpha}1 bound to these TREs with different homodimer/monomer ratios in the rank order of Lys > DR4 > Pal. Thus, w-TR{alpha}1 bound to Lys mainly as a homodimer (lane 1 of Fig. 5AGo), whereas w-TR{alpha}1 bound to Pal mainly as a monomer (lane 1 of Fig. 5CGo). w-TR{alpha}1 bound to these three TREs equally well as a heterodimer with RXR{alpha} or RXRß (lanes 2 and 3 of Fig. 5Go, A–C).



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Figure 5. Binding of the wild-type or mutant TR{alpha}1 to Lys (A), DR4 (B), or Pal (C) by electrophoresis mobility shift assay. An equal amount (5 µl) of in vitro translated TR{alpha}1 was incubated with [32P]TREs (~10,000 cpm) in the absence (lanes 1) or presence of 1 µl RXR{alpha} (lanes 2, 5, and 8) or 1 µl RXRß (lanes 3, 6, and 9) The bound TRs were analyzed by gel electrophoresis as described in Materials and Methods. Lanes are as marked.

 
Binding of mutants to these TREs as a homodimer was clearly different from that of w-TR{alpha}1. Lanes 7 of Fig. 5Go, A–C, show that binding of mutant L to Lys, DR4, and Pal, respectively, as homodimers was greatly impaired, in that the formation of homodimers was less than 10% of that seen for w-TR{alpha}1 (lanes 1 of Fig. 5Go, A and B). Binding of mutant H to the three TREs was more complex. No effect on the binding of mutant H to DR4 as homodimers was detected (lane 1 vs. lane 4 of Fig. 5BGo), but its binding to Lys as homodimers was greatly impaired (>90% inhibition by comparing lane 1 vs. lane 4 of Fig. 5AGo), and that to Pal was markedly enhanced compared with that of w-TR{alpha}1 (lane 1 vs. lane 4 of Fig. 5CGo). Therefore, formation of mutant homodimers was TRE dependent. However, the binding of mutants H and L to the three TREs as heterodimers with either RXR{alpha} (lanes 5 and 8, respectively) or RXRß (lanes 6, and 9, respectively) was not significantly altered compared with that of w-TR{alpha}1.

To assess the functional consequences of these mutations in these two mutants, we used transient transfection assays. Mammalian expression plasmids of mutants were cotransfected with the TRE-containing reporter genes into COS-1 cells. Figure 6Go compares the trans-activational activity of mutants H and L on the three TREs. The trans-activational activities of the w-TR{alpha}1 and mutant J7-TR{alpha}1 (14) were also included for comparison. As expected, the trans-activational activity of w-TR{alpha}1 mediated by Lys (Fig. 6AGo), ME (a DR4-type TRE; Fig. 6BGo), and Pal (Fig. 6CGo) was increased in a T3-dependent manner, whereas, consistent with the previous findings, mutant J7-TR{alpha}1 had no trans-activational activity (14). However, similar to that seen for J7-TR{alpha}1, mutants H and L had little or no trans-activation activity. These results indicate that the trans-activation activity of the TR{alpha}1s was consistent with the hormone-binding activity. We have also evaluated the silencing effect of mutants. Figure 6DGo shows that mutants H and L had ~a 40% greater silencing effect than w-TR{alpha}1 on Pal, whereas on ME and Lys, the extent of silencing was similar to that of w-TR{alpha}1.



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Figure 6. A–C, T3-dependent trans-activation activity of w-TR{alpha}1 and mutant TR{alpha}1 mediated by Lys (A), ME (B), or Pal (C). COS-1 cells (6 x 105 in 60-mm dish) were plated, and after 24 h, 1 µg TRE reporter plasmid and 0.5 µg TR{alpha}1 mammalian expression plasmids were transfected into COS-1 cells in 2 ml serum-free medium using the Lipofectamine method according to the manufacturer’s instructions. After 5 h, an equal volume of 10% T3-depleted serum was added to the cells. After incubation for an additional 24 h, the medium was changed to either fresh 5% T3-depleted serum only or serum that contained increasing concentrations of T3 (0.1–10 nM). Cell lysates were prepared, and luciferase activity was determined according to the manufacturer’s instructions (Promega). Luciferase activity was normalized to the protein concentration of lysates. Data are the average of three experiments, each performed in duplicate (mean ± SD; n = 3). D, The silencing effect of the wild-type and mutant TR{alpha}1. The luciferase activity was detected as described in A–C. Data are average of triplicate samples.

 
We further evaluated the dominant negative action of these mutants by examining their inhibitory effect on the trans-activational activity of w-TR{alpha}1. J7-TR{alpha}1, which has been shown to be a strong dominant negative mutant, was used as a control (14). An unusual pattern of dominant negative potency emerged for these mutants. When equal amounts of mutant and w-TR{alpha}1 expression plasmids were transfected, the rank order of dominant negative potency was Pal > DR4 > Lys for mutant H (Fig. 7Go, A–C). This is in contrast to what has been seen for the TRß1 PV mutant, in which Lys mediated the strongest dominant negative activity (18, 23). For mutant L, a weaker dominant negative activity than that of mutant H was observed, which was not significantly affected by the type of TRE. At a higher mutant/w-TR{alpha}1 plasmid ratio of 5, the dominant negative potency of mutant H on Lys, DR4, and Pal was increased 10-, 3-, and 2-fold, respectively, with no changes in the rank order for these TREs. The dominant negative potency of mutant L was also increased (~3-fold) when the mutant/w-TR{alpha}1 plasmid ratio was increased to 5; however, no TRE dependency was seen. The dominant negative effect detected for mutants H and L was not due to the different expression levels of w-TR{alpha}1, mutant H, or mutant L, because identical amounts of w-TR{alpha}1, mutant H, and mutant L were expressed in the transfected cells, as determined by Western blotting (lanes 1 vs. 2 and 3 of Fig. 8Go). Thus, among these three TREs, Pal which bound to mutant H with the most avidity, mediated the strongest dominant negative activity. Mutant L, which had weak binding to all three TREs, had similarly weak dominant negative activity (see Fig. 5Go, A–C). These results indicate that there was a correlation between homodimer formation and dominant negative potency for these two mutants.



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Figure 7. Dominant negative potency of TR{alpha}1 mutants. Mammalian expression plasmids of TR{alpha}1 mutants (0.5 or 2.5 µg), TRE-containing reporter plasmids (1 µg), and w-TR{alpha}1 expression plasmid (0.5 µg) were transfected into COS-1 cells similarly, as described in Fig. 6Go. Mutant J7-TR{alpha}1 expression vector (0.5 or 2.5 µg) was also cotransfected with reporter plasmid (1 µg) and w-TR{alpha}1 expression plasmid (0.5 µg) as a control. The luciferase activity was determined and normalized to the protein concentration of lysates. Data are the average of three experiments, each performed in duplicate (mean ± SD; n = 3).

 


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Figure 8. The expression of wild-type and mutant TR{alpha}1 proteins in transfected COS-1 cells. The lysates (30 µg) obtained from the COS-1 cells transfected with w-TR{alpha}1, mutant H, or mutant L expression plasmid (2.5 µg) as described in Fig. 7Go were analyzed for receptor protein expression by Western blotting as described in Materials and Methods. Lanes are as indicated.

 

    Discussion
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 
We have isolated and characterized two naturally occurring mutant forms of TR{alpha}1 from hepatocellular carcinomas of two patients. These two mutant receptors, mutant H (V390A) and L (E350K/P398S), had distinct properties. Compared with w-TR{alpha}1, the binding of mutant L to all three classes of TREs as homodimers was defective. The DNA-binding characteristics of mutant H were TRE dependent. Homodimer binding to DR4 was not altered, whereas that to Lys was greatly impaired, and that to Pal was markedly enhanced. In addition, mutants H and L had lost their abilities to bind T3 as well as their hormone-dependent trans-activational activities. There was no change in the abilities of these mutant receptors to bind to all three TREs as heterodimers with RXR{alpha} and RXRß.

Among the members of the steroid/thyroid hormone receptor superfamily, TRs are unique in that their isolated DNA-binding domains (DBD) can bind efficiently to DNA as monomers (24, 25, 26). Based on the crystal structure of an RXR/TRß-DBD complex with a DR4 TRE, Rastinejad et al. (27) ascribed this behavior to increased protein-DNA interactions induced by the A helix of the TR DBD, which is absent in other nuclear receptors. Intact TR{alpha}1 and TRß1 differ markedly in their abilities to bind to DNA as monomers or homodimers, and these differences are TRE dependent. Using chimeric receptors made by exchanging domains between TR{alpha}1 and TRß1, we showed that these differences were not intrinsic properties of their DBDs, but resulted from interplay between the domains of the proteins (28). Chimeric TRs containing domains D or E of TRß1 showed increased propensities to form homodimers and mediated higher trans-activational activities than TR{alpha}1. However, no significant differences in the abilities of these chimeric TRs to form heterodimers with RXR were detected. Consequently, it is not surprising that these mutations, which occur in domain E of TR{alpha}1, have major effects on DNA binding. These must reflect the effects of the amino acid substitutions on local structure and domain interactions and could account for the differences in the TRE-dependent binding to these mutants.

As a result of their mutations, mutants H and L had lost transcriptional activity. The residues that are mutated in these two mutant receptors are located in regions that have been shown to be intimately involved in the various functions of TRs. Mutant L was mutated in two separate locations. The first of these, E350, is conserved in most TRs (29). In the crystal structure of rat w-TR{alpha}1 ligand-binding domain (LBD), Wagner et al. (30) placed this residue in helix 10, which together with helix 11 was suggested to form a surface for homodimerization of intact receptors. At neutral pH, glutamate and lysine are similar in their helix-forming propensities, so little structural disruption may occur. However, the change in charge produced by mutation E350K could have drastic effects on intermolecular interactions. The second mutated residue, P398, is in the same region of the molecule as residue V390, the mutated residue in mutant H. From comparisons of the crystal structures of both apo and holo forms of the LBDs of several members of the steroid/thyroid hormone receptor family, a consensus mechanism of ligand-binding and hormone-induced gene activation has been proposed (31, 32). In apo RXR{alpha}, the C-terminal helix 12 protrudes from the LBD into solution. In the holo forms of RAR and TR{alpha}1 LBDs, this helix is folded back onto the body of the protein, providing part of the ligand-binding cavity, realigning the AF-2 sequence, which it carries, and perturbing the homodimerization interface via helix 11. Binding of hormone is thought to accompany this transformation, which is dependent on the flexibility of the loop connecting helixes 11 and 12. The two residues in question are located in the last and first turns of helixes 11 and 12, respectively. Their replacement by helix-favoring side-chains (V390A or P398S) can be expected to increase rigidity in this region, impairing the hormone binding and thus the obligatory conformational changes required for hormone-dependent transcriptional activity (3, 31, 32).

Both mutants H and L acted to inhibit the trans-activation activity of w-TR{alpha}1. The dominant negative potency of mutant H was TRE dependent, with the rank order of Pal > DR4 > Lys, whereas for mutant L, it was TRE independent. This rank order of dominant negative potency of mutant H correlated well with the ability of mutants to bind to TREs as homodimers. Binding of mutant H homodimers to Pal was the strongest among three TREs (Pal > DR4 > Lys), whereas formation of mutant L homodimers was defective on all TREs. Furthermore, we have previously shown that mutant J7-TR{alpha}1 binds to TREs as homodimers in the rank order of Lys > DR4 > Pal (14). Its dominant negative potency was found in the rank order of Lys > DR4 > Pal (14). The correlation of dominant negative potency with the ability of mutants to form homodimers is not limited to the TR{alpha}1 mutants. Previously, Kitajima et al. have also shown that selective loss of homodimerization of the TRß1 mutant (R316H) correlated with reduced dominant negative activity (33, 34).

To date, no TR{alpha}1 mutants have been identified from RTH patients. However, the present study isolated TR{alpha}1 mutants from patients with hepatocellular carcinoma. Therefore, mutations of the TR{alpha} gene do occur naturally, but most likely may not be found in RTH patients. This raises the possibility that the mutants of TR isoforms may be involved in mediating different abnormalities via the common mode of dominant negative action. Although evidence is still lacking to directly link the mutations of the TR{alpha} gene to the pathogenesis of hepatocellular carcinoma, the isolation of TR{alpha}1 mutants that had dominant negative action suggests that mutations of the TR{alpha} gene could play an important role in the tumorigenesis of liver. This possibility is supported by the observation that transgenic mice harboring v-erbA, an oncogenic homolog of TR{alpha}1 and a dominant negative transcription factor of TRs, develop hepatocellular carcinoma (35). Furthermore, increasing evidence has been presented to support isoform-specific functional roles of TR{alpha}1 and TRß1. Strait et al. showed that the gene encoding PCP-2 is regulated by TRß1, but not by TR{alpha}1 (36). T3-dependent negative regulation of TRH promoter was shown to be mediated by TRß1, but not by TR{alpha}1 (37). Lebel et al. showed that in a stably transfected neuronal cell line, only cells overexpressing TRß1, not TR{alpha}1, can respond to T3 to exhibit morphological and functional characteristics indicative of neural differentiation (38). The most compelling evidence for the isoform-specific functional role of TRs was provided by the recent TRß gene knock-out mouse model, in that a unique role of TRß in the pituitary-thyroid axis was demonstrated (39). Based on these findings, it is reasonable to postulate that mutations of TR subtypes may lead to different phenotypic manifestations through a common mechanism of dominant negative action. How this is accomplished in vivo will have to await future studies.


    Acknowledgments
 
We thank Dr. J. L. Jameson for the double-Pal-TK-Luc plasmid, Dr. L. J. DeGroot for Lap-TK-Luc and ME-TK-Luc plasmids, and Dr. R. M. Evans for human RXR{alpha} and RXRß plasmids.


    Footnotes
 
1 This work was supported by Chang-Gung Research Grant CMRP 460, NMRP 474, and the National Science Council (Republic of China) Grant NSC 84–2331-B-182–069 (to K.-h.L., H.-C.H., S.-L.C., S.-T.C., and H.-y.S.). Back

Received May 28, 1997.


    References
 Top
 Abstract
 Introduction
 Materials and Methods
 Results
 Discussion
 References
 

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