| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
ARTICLES |
Division of Genetics, Department of Medicine, Brigham and Womens Hospital and Harvard Medical School, Boston, Massachusetts 02115
Address all correspondence and requests for reprints to: Dr. Noriyuki Koibuchi, Division of Genetics, Department of Medicine, Brigham and Womens Hospital, 75 Francis Street, Thorn 1009, Boston, Massachusetts 02115. E-mail: koibuchi{at}rascal.med.harvard.edu
| Abstract |
|---|
|
|
|---|
| Introduction |
|---|
|
|
|---|
To study the molecular mechanisms of TH action on brain development, the rodent cerebellum may be an excellent model. In the rodent cerebellum, neuronal development is largely postnatal (4), and perinatal hypothyroidism dramatically affects the morphogenesis of this region (5, 6, 7, 8). Growth, dendritic arborization, and dendritic spine number of Purkinje cells are markedly decreased (8). Synaptic formation between the Purkinje and granule cells in the molecular layer are also dramatically reduced (5, 7). The rate of proliferation of granule cells in the external granule cell layer is diminished, and their migration into the internal granule cell layer (IGL) is retarded (6). Most of these abnormalities cannot be rescued unless TH is replaced within 2 weeks after birth (9). Based on these observations and the fact that TRs are expressed in Purkinje and granule cells during development (10, 11), these cells are considered to be critical targets of TH. However, despite the fact that many genes are known to be altered by perinatal hypothyroidism (12, 13, 14, 15, 16, 17), a TR-regulated gene(s) that plays a critical role in abnormal neurogenesis in hypothyroid animal has not yet been identified.
Brain-derived neurotropic factor (BDNF) belongs to the neurotropin family, which plays an essential role in the development of the peripheral and central nervous systems (18). Neurotropins also include nerve growth factor, neurotropin-3 (NT-3), and NT-4/5. In the developing cerebellum, BDNF is expressed in both granule and Purkinje cells (14). BDNF secreted from Purkinje and granule cells acts on granule cells to promote axonal elongation and to enhance survival (19, 20). BDNF also increases the expression of NT-3 that is stimulated by TH (21).
In the hypothyroid cerebellum, BDNF messenger RNA (mRNA) levels are suppressed, and grafting cell lines expressing BDNF into the fourth ventricle in part, but not completely, prevents hypothyroidism-induced abnormal cerebellar development (14). These results indicate that the TH effect is at least partially exerted through BDNF. Further, BDNF knockout mice exhibit delayed migration of granule cells and decreased arborization of Purkinje cell dendrites (22), which are also seen in hypothyroid animals (8). Whether TH directly regulates the expression of the BDNF gene is not known.
Given the important role of BDNF in TH-mediated cerebellar development,
we decided to study the regulation of the BDNF gene by TH by first
analyzing the effect of TH on its promoter. As shown in Fig. 1
, the rat BDNF gene consists of five
exons (23, 24). Exons IIV are 5'-untranslated exons, associated with
different promoters. Exon V contains the open reading frame for the
BDNF protein. There are also two polyadenylate [poly(A)]
addition sites. Thus, BDNF mRNAs consist of one of four untranslated
exons and exon V as a result of different promoter usage and
alternative splicing (23, 24). These multiple promoters are
alternatively used in a tissue-specific manner (25). In the developing
brain, different promoters have specific regulation patterns but are
expressed coordinately in each brain region, suggesting that each
promoter has both distinct and common regulatory elements (26).
|
To understand this apparent paradox, we studied TH regulation of the different BDNF gene promoters. We used a ribonuclease (RNase) protection assay (RPA) to measure the expression of the different BDNF mRNAs during cerebellar development.
| Materials and Methods |
|---|
|
|
|---|
Preparation of exon-specific BDNF probes
DNAs containing rat BDNF genomic fragment were provided by Drs.
O. Ohara and T. Kitamura, Shionogi Research Laboratories (Osaka, Japan)
(24). To prepare the exon-specific probes, the DNA fragments were
amplified using PCR. A sense (5'-CTCCCTCACTTTTTCTGCGAAC-3', nucleotides
734755) (23) primer with BamHI linker at the 5'-site, and
an antisense (5'-CGGGATCCTCCCTCACTTTTTCTGGGAAC-3', nucleotides
996959) (23) primer that contains the internal HindIII
site for the exon I-specific probe were used. For the exon II-specific
probe, a sense (5'-CGGAGCGTTTGGAGAGCCAGC-3', nucleotides 20452065)
(23) primer with BamHI linker at the 5'-site and an
antisense (5'-CGGCTTACACCACCCCGGTGG-3', nucleotides 22212201) (23)
primer with KpnI linker at the 5'-end were used. For the
exon III-specific probe, a sense (5'-CGTGCGAGTATTACCTCCGCC-3',
nucleotides 859879) (23) primer with BamHI linker at the
5'-site and an antisense (5'-CTGCTCTGGGGAAGACCGGTC-3', nucleotides
935915) (23) primer with KpnI linker at the 5'-site
were used. For the exon IV-specific probe, a sense
(5'-CTGAGCTCTGGGTGCCCGCCG-3', nucleotides 17891809) (23) primer with
BamHI linker at the 5'-site and an antisense
(5'-CACGCTCCTGGTCCCTGCGCC-3', nucleotides 20262006) (23) primer with
KpnI linker at the 5'-site were used. For the exon
V-specific probe, a sense (5'-CCTACCCAGCTGTGCGGACCC-3', nucleotides
226246) (28) primer with BamHI linker at the 5'-site and
an antisense (5'-ACCCGGGAAGTGTACAAGTCC-3', nucleotides 415395)
(28) primer with KpnI linker at the 5'-site were used. Each
probe was designed to lack any known multiple transcription start sites
(23, 24). The PCR fragments were digested with the appropriate
restriction endonucleases and subcloned into pBluescript II
KS+.
To make a radiolabeled riboprobe, each plasmid was linearized with BamHI. Then, riboprobes were transcribed using T3 RNA polymerase (Promega Corp., Madison, WI), and [32P]UTP was incorporated to label the probe. The predicted sizes of exons I, II, III, IV, and V probes were 260, 177, 178, 238, and 190 bases, respectively. For a control, radiolabeled riboprobe for rat cyclophilin (103 bases; Ambion, Inc. Austin, TX) was also prepared.
RNA extraction and RPA
Total RNA from pooled cerebellum and cerebral cortex (710
brains for P2, 57 for P7, 23 for P15, 12 for P30, and 1 for
adult) was extracted using the acid guanidinium
thiocyanate-phenol-chloroform method (29) and stored at -80 C until
use.
RPA was performed using the RPA II kit (Ambion, Inc.), as reported previously (17). Twenty-microgram samples were hybridized with exon I/exon II, exon III/exon IV, or exon V, (300,000 cpm/probe·sample). The riboprobe for cyclophilin (20,000 cpm/sample) was also hybridized together with each probe. Hybridization was carried out overnight at 45 C, followed by RNase A/RNase T1 digestion. The protected fragments were separated on a 5% polyacrylamide/8 M urea gel. Then, the gel was dried and subjected to phosphorimaging (Molecular Dynamics, Inc., Sunnyvale, CA) overnight for quantitative analysis of protected bands and then to x-ray film at -80 C for 10 days. The amount of mRNA was internally standardized using cyclophilin mRNA levels, and the difference in each hybridization was standardized using the same adult RNA samples hybridized together.
Differences between treatment groups were examined by ANOVA. Post-hoc comparison was made using Duncans new multiple range test. The results were considered significant at P < 0.01.
| Results |
|---|
|
|
|---|
Figure 2
shows representative results of
the RPA. Quantification was performed using a phosphorimager. The data
were normalized using cyclophilin mRNA and adult brain mRNA (see
Materials and Methods). In the cerebellum, exon I mRNA was
down-regulated, whereas exon IIIV mRNAs were up-regulated during
development. Exon II mRNA was most strongly expressed; on P30, the
amount of exon II mRNA in T4-replaced euthyroid animals was
approximately 5- and 8-fold greater than those of exons III and IV,
respectively. The most striking effect of TH was seen on P15; the
strength of the hybridization signal for exon II was always higher in
T4-replaced animals. The expression of exon III and IV
mRNAs was detected on P15 and P30 in TH-replaced animals, whereas the
expression was not seen by P30 in hypothyroid animals.
|
In the cerebellum, exon I mRNA was down-regulated during development,
and TH repressed its expression on P2 (Fig. 3
). In the cerebrum, on the other hand,
the mRNA was developmentally up-regulated, and TH tended to repress the
expression of exon I mRNA, but the extent varied among the experiments
and did not reach statistical significance (Fig. 3
).
|
|
|
|
|
| Discussion |
|---|
|
|
|---|
In the developing cerebellum, the expression of many genes is known to be altered by perinatal hypothyroidism (12, 13, 14, 15, 16, 17). Interestingly, after the critical period, the expression of many genes altered by perinatal hypothyroidism return to levels seen in the euthyroid animal despite apparent morphological alterations (12, 13, 15, 17), although some of these genes are known to be regulated directly by TR (30, 31). The changes in expression of these genes do not reflect those in TRs, as the pattern of change in TR expression by perinatal hypothyroidism is different from those in other genes known to be altered in hypothyroid animals (17, 32). A key TR-regulated gene(s) that plays a major role in abnormal neurogenesis in hypothyroid animals has not yet been identified. Considering the critical role of BDNF in cerebellar development, the results of our present study indicate that the BDNF gene may be one such candidate, playing a key role in hypothyroidism-induced abnormal cerebellar development.
As exon IIIV mRNAs are regulated by TH, each promoter might contain a TH response element. However, we cannot conclude that these promoters are directly regulated by TH based solely on the present results. Our preliminary transfection study was also not helpful, because we saw only TH-dependent repression on promoters with exons I and II, probably due to the tissue and developmental stage specificity of each promoter. There are other possibilities, including 1) TH alters the stability of BDNF mRNAs; and/or 2) TH regulates the expression of other transcription factors that bind specifically to each promoter. TH is capable of modulating the stability and poly(A) tail length of TSH ß-subunit mRNA (33) in part by modulating the interaction of a RNA-binding protein to its 3'-untranslated region (34). Further, TH is capable of modulating the interaction between iron regulatory proteins and the ferritin mRNA iron-responsive element located in the 5'-untranslated region (35). The mRNA sequence to which TH-regulated RNA-binding protein binds contains a consensus region, UUA(or G)AAU(or A)GUGUUU (34). We have identified a region homologous to such a sequence within the exon II sequence (AUGCAAGUGUUU, nucleotides 21762187) (23). Therefore, BDNF mRNA may be also regulated at the posttranscriptional level by TH via a similar mechanism through the 5'-untranslated region of each BDNF mRNA. Other approaches need to be considered to determine the exact mechanism of TH action in BDNF gene expression. However, we believe that the present study has provided an important step toward our understanding of BDNF gene regulation by TH.
During postnatal cerebellar development, which subsets of BDNF mRNAs are expressed in which subset of cells are not clear. In the cerebellar cortex, BDNF mRNA is not detectable by in situ hybridization during the first two postnatal weeks (36), although BDNF immunoreactivity is strong in the Purkinje cells and relatively weak in the granule cells in the IGL as early as P8 (22). By P20, BDNF mRNA is strongly expressed in granule cells in the IGL and weakly in Purkinje cells (14, 36). By RPA analysis, a previous study also failed to detect BDNF mRNA in the developing cerebellum during the first 2 postnatal weeks (26) probably due to detection sensitivity, as smaller amounts of RNA (10 µg) were used. Although the amount of BDNF in the cerebellum during this postnatal period is low, BDNF probably plays an important role in the initial postnatal cerebellar development, as abnormal cerebellar development is already evident by P14 in BDNF-/- mice (22). The present study has clearly shown that the BDNF is expressed as early as P2 in the developing cerebellum, which may be critical for normal cerebellar development. However, it may be difficult to study the differential expression of each subset of BDNF mRNA in each cerebellar cell type during early postnatal cerebellar development because of their limited level of expression.
The physiological significance of multiple transcripts of BDNF is not known. Specific promoter usage in each subset of cells may confer the cell-specific and developmental stage-specific differential expression of BDNF gene. Further, it is known that the 5'-untranslated region is involved in regulating the efficiency of translation and/or stability of mRNA, which, in turn, also plays an important role in the control of gene expression (37). The small (40S) subunit of ribosome is bound initially at the 5'-end of mRNA to initiate translation (37). The binding of the 40S ribosomal subunit to this site is altered by a RNA-binding protein(s) (38) and/or by secondary structure within the 5'-noncoding region (39). Therefore, although all BDNF gene transcripts generate the same protein, different 5'-untranslated regions may mediate altered stability or translational efficiency of each mRNA, with corresponding differences in protein levels. As mentioned above, TH may be involved in regulation of the translational efficiency and/or stability of BDNF gene transcripts by altering the interaction with RNA-binding proteins.
In summary, during cerebellar development, all BDNF gene noncoding exon mRNAs (IIV) are detected by RPA, but their expression patterns are different. Daily TH replacement induced a 3-fold increase in exon II mRNA on P15. On P30, exon II mRNA was still higher in the TH-replaced animal. Exon I mRNA was detected on P2 and P7. However, in contrast to exon II mRNA, TH treatment suppressed the expression of exon I mRNA on both days. Exon III and IV mRNAs were not detected on P2 and P7, but small amounts were seen starting on P15 in TH-replaced animals. They were not detected by P30 in hypothyroid animals. In contrast, in the cerebral cortex, although all exons were differentially regulated during development, the expression of each mRNA was not altered by TH. These results indicate that TH regulates BDNF gene expression in a promoter-, developmental stage-, and brain region-specific manner, which may play an important role in region- and stage-specific regulation of brain development by TH.
| Acknowledgments |
|---|
| Footnotes |
|---|
2 Present address: Department of Physiology, Dokkyo University School
of Medicine, Mibu, Tochigi 32102, Japan. ![]()
Received December 14, 1998.
| References |
|---|
|
|
|---|
2 in selected tissues: cerebellar
Purkinje cells as a model for ß1 receptor-mediated developmental
effects of thyroid hormone in brain. Proc Natl Acad Sci USA 88:38873891
- and ß-thyroid hormone receptor mRNAs,
including the ß2-subtype, in the developing mammalian nervous system.
J Neurosci 12:22882302[Abstract]
gene expression in
the perinatal rat cerebellum: ontogeny and thyroid hormone regulation.
Endocrinology 139:23352341
isoforms during neonatal brain development. Mol Endocrinol 5:11091119This article has been cited by other articles:
![]() |
V. L. Adams, R. L. Goodman, A. K. Salm, L. M. Coolen, F. J. Karsch, and M. N. Lehman Morphological Plasticity in the Neural Circuitry Responsible for Seasonal Breeding in the Ewe Endocrinology, October 1, 2006; 147(10): 4843 - 4851. [Abstract] [Full Text] [PDF] |
||||
![]() |
L. F Reichardt Neurotrophin-regulated signalling pathways Phil Trans R Soc B, September 29, 2006; 361(1473): 1545 - 1564. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. Heuer and C. A. Mason Thyroid Hormone Induces Cerebellar Purkinje Cell Dendritic Development via the Thyroid Hormone Receptor {alpha}1 J. Neurosci., November 19, 2003; 23(33): 10604 - 10612. [Abstract] [Full Text] [PDF] |
||||
![]() |
R. Martinez and F. C. A. Gomes Neuritogenesis Induced by Thyroid Hormone-treated Astrocytes Is Mediated by Epidermal Growth Factor/Mitogen-activated Protein Kinase-Phosphatidylinositol 3-Kinase Pathways and Involves Modulation of Extracellular Matrix Proteins J. Biol. Chem., December 13, 2002; 277(51): 49311 - 49318. [Abstract] [Full Text] [PDF] |
||||
![]() |
W. M. Wood, V. D. Sarapura, J. M. Dowding, W. W. Woodmansee, D. J. Haakinson, D. F. Gordon, and E. C. Ridgway Early Gene Expression Changes Preceding Thyroid Hormone-Induced Involution of a Thyrotrope Tumor Endocrinology, February 1, 2002; 143(2): 347 - 359. [Abstract] [Full Text] [PDF] |
||||
![]() |
L. D. Miller, K. S. Park, Q. M. Guo, N. W. Alkharouf, R. L. Malek, N. H. Lee, E. T. Liu, and S.-y. Cheng Silencing of Wnt Signaling and Activation of Multiple Metabolic Pathways in Response to Thyroid Hormone-Stimulated Cell Proliferation Mol. Cell. Biol., October 1, 2001; 21(19): 6626 - 6639. [Abstract] [Full Text] [PDF] |
||||
![]() |
P. M. Yen Physiological and Molecular Basis of Thyroid Hormone Action Physiol Rev, July 1, 2001; 81(3): 1097 - 1142. [Abstract] [Full Text] [PDF] |
||||
![]() |
K. Hashimoto, F. H. Curty, P. P. Borges, C. E. Lee, E. D. Abel, J. K. Elmquist, R. N. Cohen, and F. E. Wondisford An unliganded thyroid hormone receptor causes severe neurological dysfunction PNAS, March 1, 2001; (2001) 51454698. [Abstract] [Full Text] |
||||
![]() |
K. Hashimoto, F. H. Curty, P. P. Borges, C. E. Lee, E. D. Abel, J. K. Elmquist, R. N. Cohen, and F. E. Wondisford An unliganded thyroid hormone receptor causes severe neurological dysfunction PNAS, March 27, 2001; 98(7): 3998 - 4003. [Abstract] [Full Text] [PDF] |
||||
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
| Endocrinology | Endocrine Reviews | J. Clin. End. & Metab. |
| Molecular Endocrinology | Recent Prog. Horm. Res. | All Endocrine Journals |