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Monash Institute of Reproduction and Development (M.K.O., L.M.F., J.F.C., W.R.W., J.A.M., K.S., D.M.d.K., M.P.H.), The Australian Research Council (ARC) Centre of Excellence in Biotechnology and Development (M.K.O., D.M.d.K.), and The ARC Special Research Centre for Green Chemistry (H.-H.K., M.T.W.H.), Monash University, Clayton 3168; and The Baker Medical Research Institute (A.I.S.), Prahran 3181, Melbourne, Victoria, Australia
Address all correspondence and requests for reprints to: Moira OBryan, Ph.D., The Centre for Molecular Reproduction and Development, Monash Institute of Reproduction and Development, 2731 Wright Street, Clayton 3168, Melbourne, Victoria, Australia. E-mail: moira.obryan{at}med.monash.edu.au.
| Abstract |
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| Introduction |
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It is well established that testicular secretions inhibit T-lymphocyte activation and proliferation (6, 7), and similar activity has been reported in the fluid surrounding the egg in the ovarian follicles (8, 9). This follicular fluid is rich in both ovarian-derived and serum-borne proteins (10, 11). During attempts to purify factors responsible for the inhibition of T-lymphocyte function, an apolipoprotein-rich fraction was isolated from bovine follicular fluid (bFF). This fraction was composed of several high-density lipoprotein (HDL)-associated proteins, including a previously uncharacterized protein, which we have identified as a novel apolipoprotein related to the cholesterol transport regulatory protein, ApoF (12, 13). Whereas certain lipoproteins and their associated apolipoproteins have been shown to possess immunoregulatory properties (14), HDLs specifically play a major role in the regulation and support of ovarian steroidogenesis (15, 16). Consequently, the discovery of a unique apolipoprotein in the follicular fluid is likely to be highly significant for understanding a number of aspects of ovarian function. Herein, we describe the isolation, sequencing, and partial characterization of this novel apolipoprotein, which we have designated ApoN. ApoN is only the second member to be identified in a protein family that currently is represented by ApoF alone.
| Materials and Methods |
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Methanol extraction and reversed phase HPLC (RP-HPLC) fractionation of bFF
Before processing, multiple aliquots of bFF were thawed and pooled and aliquots of 25 ml were re-frozen in the absence of protease inhibitors. Each aliquot was processed as follows: the bFF was thawed and 2 x 12.5 ml was transferred to 250-ml Sorvall polypropylene centrifuge bottles, and each had 187-ml ice-cold HPLC grade methanol/50 mM NH4HCO3 (pH 7.5) added slowly with agitation at 4 C. This mixture was left to stand for 10 min at 4 C with occasional agitation, then centrifuged at 10,000 x g for 30 min at 4 C. Water and trifluoroacetic acid (TFA; Pierce, Rockford, IL) were added to a final concentration of 30% methanol/0.1% TFA. This solution was clarified through several 0.5-µm filters and degassed before loading at 1.0 ml/min through a Waters Pump 6000A (Waters Corp., Milford, MA) onto a C3 semipreparative RP-HPLC column (Ultrapore C3, Beckman Coulter, Fullerton, CA), after a 50-ml wash with 30% methanol/0.1% TFA. The loaded column was transferred to an HPLC system (LKB Produckter AB, Bromma, Sweden) and washed with a further 50 ml of 30% methanol/0.1% TFA before elution. The column was then subjected to RP-HPLC using a 0.1% TFA/30%-100% methanol staggered gradient over 45 min at a flow rate of 3.0 ml/min. Collected fractions (3 ml) were assessed for biological activity in a lymphocyte proliferation bioassay, as described below.
In vitro lymphocyte proliferation inhibition assay
Mechanically isolated thymic cells from young adult (6080 d old) male inbred Dark Agouti rats were cultured (37 C, 96 h) in 96-well culture plates (0.8x 106 cells/well), in DMEM with 1% heat-inactivated fetal calf serum and 25 µM ß-mercaptoethanol, in the presence of a suboptimal dose of mitogen (28 µg phytohemagglutinin/well), as previously described (7). The isolated thymic cells were preplated for 30 min at 37 C to reduce adherent cells before transfer to culture. Test samples were added at the start of the culture, and cell growth was determined by the incorporation of [3H]thymidine added during the final 1620 h of culture.
SDS-PAGE
Fractions obtained from the RP-HPLC fractionation of bFF were run on 18% PAGE gels in Tris-tricine buffer by a modification of the method of Schägger and von Jagow (21) using a single electrode buffer under nonreducing and reducing conditions. Protein bands were identified by silver staining (22).
Amino acid sequencing
Two bioactive fractions from each of two RP-HPLC profiles were lyophilized, redissolved in Tris-tricine sample buffer, and heated at 95 C for 5 min. Pooled samples were run in duplicate lanes, together with known molecular weight markers on two sides of an 18% Tris-tricine PAGE reducing gel. At the conclusion of the electrophoresis, the separated proteins on one side of the gel were transferred to a polyvinylidene fluoride membrane, then stained with Coomassie blue R-250 for 30 sec followed by destaining in 16.5% methanol/5% acetic acid /78.5% water. The protein bands of interest were excised from the membrane and applied to an on-line Applied Biosystems (Foster City, CA) 470A gas phase sequencer equipped with an on-line Applied Biosystems 120A HPLC for analysis of the phenylthiohydantoin-derivatized amino acids.
The second half of the gel was stained for 15 min with Coomassie blue R-250 and the bands of interest excised and subjected to digestion with trypsin alone or trypsin/V8 in ammonium bicarbonate at 37 C for 40 h, as described previously (23), followed by reduction and alkylation with ß-mercaptoethanol at 37 C for 1 h and 4-vinylpyridine at 37 C for 1 h. The tryptic digest was fractionated on a microbore Poly LC C8 column at 50 C using a 0.1% TFA/60% acetonitrile gradient over 1 h and the collected digest peaks were sequenced as described above.
After amino acid sequencing and database interrogations, one of the protein bands isolated from bFF corresponding to a molecular mass of 12 kDa on SDS-PAGE under reducing conditions was found to be a previously unidentified protein. This protein was designated apolipoprotein N (ApoN), following in rank order from the most recently described apolipoprotein, ApoM (24).
Cloning of porcine ApoN
Full sequence details of all primers used in this study are listed in Table 1
. The bovine peptide sequences obtained from Edman degradation sequencing were used to perform a basic local alignment search tool (BLAST) search of the GenBank expressed sequence tag (EST) database. At the time of protein sequencing, a single EST (GenBank accession no. AW359350) derived from pooled Sus scofa endocrine tissues was identified with significant homology to the bovine ApoN peptides FF#3 and FF#4 (see Fig. 1
). This fragment was subsequently amplified using RT-PCR from porcine ovarian follicle tissue. For RT, no more than 2 µg of total RNA were reverse transcribed using the primer CDSP using standard methods. ApoN cDNA was subsequently amplified in the presence of 1 U Taq polymerase, 10x PCR buffer [0.15 mM MgCl2 (pH 8.3)], 2 mM deoxynucleotide triphosphates and 1 µM of primers P3 and P5. Reactions were thermocycled under the following conditions: an initial denaturation of 94 C for 3 min followed by 35 cycles of 94 C for 30 sec, 58 C for 30 sec and 72 C for 30 sec. Cycling was followed by a final extension of 72 C for 5 min. The partial AW359350 sequence was TA cloned into the PCRII plasmid (Invitrogen Life Technologies, Carlsbad, CA) as described by the manufacturer. Additional 3'-sequence was obtained by 3'-rapid amplification of cDNA ends (RACE) as described previously (25) using the cDNA-specific primers P6 and AP3. To ensure the veracity of this sequence, and all others in this study, inserts from at least two clones were sequenced in both directions using standard protocols in The Wellcome Trust sequencing facility, Monash Medical Centre.
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The 5'-RACE strategy resulted in an additional 207 bp to the EST sequence originally obtained by database searching. This assembled partial porcine ApoN cDNA sequence was then used for a further BLAST search of the GenBank EST database. This analysis revealed the existence of an additional EST obtained from pooled porcine endocrine tissues with identity over a region of the 5' end of the assembled sequences (GenBank accession no. BF078743). The four porcine cDNA fragments obtained from database searching and RACE were assembled into the full-length porcine ApoN sequence, and this sequence was subsequently used for database and sequence analyses. The full-length porcine ApoN sequence was subsequently amplified by RT-PCR and sequenced from porcine ovary and testis.
Cloning of bovine ApoN
The fragment of the orthologous bovine ApoN sequence was initially cloned from bovine gDNA using degenerate primers, P6 and B19, based on the peptides derived from protein sequencing, using standard PCR conditions. This approach was eventually chosen because of several failed attempts to amplify ApoN from ovary and testis cDNA using degenerate primers. To increase the signal before cloning, a second round of amplification was undertaken using the degenerate primer B20 and the AP3 primer, the sequence of which had been incorporated into the 5' end of B19. The 3' end of bovine ApoN was cloned from liver and skeletal muscle RNA using 3'-RACE, as described above, using the ApoN-specific primers B21 and B22 for the first and second round amplifications, respectively. The putative 5' end of bovine ApoN was also cloned from gDNA, using a forward primer (B23) based on the porcine 5'-untranslated region (UTR) and a reverse primer derived from the known bovine ApoN sequence (B24). PCR-amplified fragments were cloned into PCRII and sequenced in both directions. 5'-RACE failed to generate a specific bovine ApoN sequence (data not shown).
Cloning of murine ApoN
The mouse ortholog of ApoN was virtually cloned based on homology between the bovine and porcine ApoN sequences and mouse ESTs. Homology was determined using the BLAST and tBLASTx algorithms (26) and the partial expression and chromosome localization revealed by searching the various National Center for Biotechnology Information (NCBI) databases (http://www.ncbi.nlm.nih.gov/).
Cloning of human ApoN-like sequence
The full-length porcine and bovine ApoN sequences were used to perform a BLAST search of the publicly accessible high-throughput genomics sequence database available through NCBI. This analysis revealed highly significant homology with a sequence within the working draft of human chromosome 12 (GenBank accession no. AC025574). Oligonucleotide primers were designed to regions of high homology between porcine/bovine and human sequences (H9 and H10) and were used to amplify a fragment of human APON-like sequence from gDNA-free human testis and ovarian RNA as already described above. The 3' end of the human APON-like sequence was subsequently cloned from ovary and testis RNA by 3'RACE using the forward primers H7 and H8. An analysis of the ApoN-like sequence indicated an insertion of 20 bp approximately 140 bp 3'-of the predicted ATG, compared with the bovine sequence. This resulted in a frame shift and ultimately the introduction of a premature stop codon. To explore the possibility that this cDNA was from a pseudogene and a functional APON sequence remained to be determined, touch-down PCR was undertaken on human ovary and testis cDNA using various combinations of the primers H11, H12, H13, and H14 in a previously described protocol (25). PCR products were cloned into PCRII and multiple APON-positive colonies from each amplification were chosen for sequence analysis.
Localization of the human APON-like gene
The existence of a human APON-like gene was initially indicated from a BLAST search of the NCBI human genome sequence, which revealed two regions of significant homology between the bovine ApoN sequence and an unordered bacterial artificial chromosome (BAC) sequence derived from chromosome 12 (GenBank accession no. AC025574). In parallel, the precise localization of the human APON-like gene was determined using a radiation hybrid protocol as outlined by the manufacturer (Research Genetics Inc., Huntsville, AL). To achieve this, three sets of primers were designed based on the region of highest homology between the porcine/bovine cDNA sequence and the human chromosome 12 BAC sequences. Primer sets included H1 and H2, H3 and H4, and H5 and H6. Before analysis on radiation hybrid plates, primer sets were tested on several samples of human gDNA and Chinese hamster ovary cell gDNA and were found to reliably detect PCR products of the predicted size from human gDNA, but resulted in no amplification products from hamster gDNA.
Translation of the human APON-like cDNA sequence indicated that the sequence obtained resulted in a truncated protein with very little homology to bovine ApoN. To determine whether an alternative APON gene was present within the human genome a Southern blot was carried out using gDNA derived from bovine, porcine, mouse, rat, and human gDNA. gDNA was extracted, HindIII digested, and size separated, as described previously (20).
Protein sequence analysis
Protein characteristics were predicted using the analysis tools available through the ExPASy molecular biology server (http://expasy. proteome.org.au).
Peptide synthesis and antibody production
Peptide sequences for antibody production were derived from the bovine ApoN peptide sequencing results. Peptide BL1 corresponded to amino acids SVTLPEACRQED of the N-terminal sequence of the purified bovine 12-kDa ApoN (peptide FF#1). Peptide BL3 corresponded to amino acids AFTMPMQDQLYF of the bovine ApoN peptide (FF#3) obtained after tryptic digestion. Peptide BL3 was synthesized with a terminal cysteine residue for the purposes of conjugating to a carrier protein, keyhole limpet hemocyanin (KLH). Peptide BL1 contained an internal cysteine that was used for conjugation. Solid-phase peptide synthesis, conjugation to KLH, and antisera generation were carried out as described previously (19). Briefly, antisera were raised by injecting (im) 300 µg of the peptide-KLH complex emulsified in Freunds complete adjuvant into virgin New Zealand White female rabbits, followed by two booster injections in Freunds incomplete adjuvant over a period of up to 12 wk. For clarity, antisera generated from these peptides were given the same nomenclature as the immunizing peptides.
Isolation of lipoproteins
Bovine follicular fluid, bovine serum and human plasma (collected in EDTA-coated tubes) were separated into chylomicron/very low-density lipoprotein (VLDL; <1.006 g/ml), low-density lipoprotein (LDL; 1.0061.063 g/ml), HDL (1.0631.21 g/ml), and lipoprotein-deficient (>1.21 g/ml) fractions by sequential potassium bromide density ultracentrifugation, using standard methods (27). Fractions were dialyzed against PBS to remove the potassium bromide, and total protein content was measured using the DC Protein assay (Bio-Rad, Hercules, CA).
Western blot analysis
To detect the presence of ApoN in ovarian and testicular extracts, and in bovine and human lipoprotein fractions, samples were prepared for Western blot analysis as described previously (19). In all cases, 20 µg of protein was size fractionated on 15% Tris-glycine SDS-PAGE gels and probed with the anti-BL1 sera at a 1:1000 dilution using a standard chemiluminescence method. The molecular mass values of the detected proteins were estimated by comparison to prestained protein markers.
ApoN expression in bovine tissues
The expression of ApoN in various bovine tissues was determined using RT-PCR. mRNA was reverse transcribed, as described above. ApoN cDNA was amplified using a nested PCR with the primers B25 and B26 in the first reaction and B27 and B28 in the second reaction under the conditions described above. To ensure that the DNA being amplified was derived from cDNA rather than gDNA, each reaction contained a no-RT control, and a sample amplified with primers complementary to bovine LH introns (LHF and LHR). The presence of mRNA in the original sample was ensured by the amplification of bovine gapdh cDNA using the primers GAPF and GAPR.
Immunohistochemistry
The distribution of ApoN protein in normal bovine tissues was determined using an avidin-biotin amplified technique, as described previously (18). Tissues tested were bovine ovary, testis, spleen, lymph node, thymus, whole eye, uterus, pancreas, heart, liver, and kidney. The specificity of the antisera (anti-BL1 and anti-BL3) in immunohistochemical protocols was determined by preabsorbing antisera with the synthetic peptides to which they were raised. An approximate 10-fold excess (wt/wt) of the immunizing peptide was added to the antiserum and incubated at 37 C for 1 h. Subsequently, the whole solution was used as the primary antibody during the immunohistochemical procedure.
| Results |
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Cloning and identification of ApoN
A search of the NCBI EST database using peptide sequences obtained by Edman degradation (Fig. 1C
) revealed significant homology between the bovine peptide sequences BL3 and BL4 and a 297-bp porcine EST (AW359350) obtained from tissues of endocrine origin (GenBank accession no. AW359350). Virtual translation of this EST in the 5'
3' direction in the third reading frame resulted in a predicted peptide of ...DFTMPMDDQIYEVKRSVAILARVILE.... This sequence shared 50% identity and 69% homology with bovine peptides BL3 and BL4 obtained by tryptic digestion (Figs. 1C
and 2
). As such, it was interpreted that AW359350 represented a partial clone of the porcine ApoN homolog. The sequence corresponding to AW359350 was subsequently amplified and sequenced. The cloned insert corresponded to nucleotides 626917 of the full-length porcine ApoN shown in Fig. 2
. The 3' end of porcine ApoN was obtained by 3'RACE, as described.
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A further BLAST search using the sequence obtained by 5'-RACE revealed partial identity with an additional porcine 5'-EST (GenBank accession no. BF078743) obtained from tissues of endocrine origin. Tiling of the four porcine ApoN fragments obtained by database searching and RACE resulted in the full-length porcine sequence of 917 nucleotides, which was deposited in the NCBI database as GenBank accession no. AY583018. This sequence contained 74 bp of 5'-UTR, 762 coding nucleotides, and 81 bp of 3'-UTR. The first methionine is predicted to be the initiation start site as it proceeded by a modified Kozak sequence and an in-frame stop codon.
Cloning of the bovine ApoN cDNA
Using a combination of standard PCR on gDNA and 3'-RACE from both liver and skeletal muscle RNA the putative sequence of bovine ApoN cDNA was determined (Fig. 3A
). In our hands, it was not possible to amplify the full-length bovine ApoN from liver or muscle RNA. This was most likely due to RNA degradation before its collection at the abattoir. It was, however, possible to reliably amplify the 5' end of ApoN (data not shown). The putative bovine ApoN sequence has been deposited within the NCBI database as GenBank accession no. AY583019.
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helices within the mature protein (Fig. 4
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Identification of murine ApoN
Searching the NCBI database with either the bovine ApoN protein or cDNA sequences revealed significant homology with several ESTs (for example, accession nos. BI246520, BI147630, and NM_133996). These sequences corresponded to the Mus musculus UniGene MGI (Mm30121). Translation of these sequences revealed significantly higher homology with bovine ApoN than with mouse ApoF (GenBank accession no. AAL06341), i.e. 52% identity/59% homology and 33% identity/52% homology respectively (Fig. 4
). Further database analysis revealed that mouse ApoN-like sequence is located on chromosome 10 in a region syntenic to human chromosome 12, and it is expressed in at least the liver, aorta and vein, gall bladder, muscle, and in hepatic tumors. These data strongly suggested that the product of UniGene Mm30121 is mouse ApoN.
This conclusion was supported by the identification of an anti-ApoN (using the anti-BL1) immunoreactive band in mouse ovary and testis extracts at 29 kDa, consistent with the size of the ApoN pre-pro-protein (Fig. 5
). A similar 29-kDa immunoreactive band was seen within rat ovary and testis extracts (Fig. 5
). The identity of the approximately 60-kDa bands in the rat ovary and testis extracts was not determined, but these may represent multimers of the rat protein due to hydrophobic interactions, comparable with the multimers observed for ApoAII in the bFF extracts (see Fig. 1B
).
Cloning of the human ApoN-like cDNA and gene localization
A BLAST analysis of the publicly accessible human genome sequence with the full-length bovine or pig ApoN clone revealed two regions with significant homology within the working draft of human chromosome 12 (GenBank accession no. AC25574). This result was confirmed by radiation hybrid analysis, which indicated the human APON-like gene was located at 12q13.2 (data not shown). Primers were designed to likely exonic sequence in the most homologous region and used to amplify the portion of the predicted protein-coding region of human APON from human ovarian and testicular RNA. The 515-bp product was sequenced. From this, it was possible to determine the sequence of a human APON-like cDNA. An additional approximately 250 bp of 3'-UTR sequence was obtained by 3'-RACE from testis RNA, showing that a APON-like mRNA was transcribed. Despite multiple attempts at 5'-RACE using several combinations of primers, it was not possible to amplify the 5' end of a human APON-like sequence using this technique (data not shown). It was however, possible to align the obtained cDNA perfectly with the sequence of BAC AC25574. From this alignment and based on homology with the bovine and porcine ApoN cDNA sequence and putative translational products, it was possible to predict the position of the initiating methionine and at least a proportion of the 5'UTR of a human APON-like protein. Based on this alignment, the human APON-like gene appeared to be a 2 exon gene with the entire protein coding region contained within the second exon. From these data, a forward primer was designed to lie just 3' of the transcription initiation site (B25). A more proximal primer was not chosen because of the additional region of significant homology with the bovine ApoN on chromosome 12 and the associated possibility of obtaining multiple amplification products. This primer was then used in a nested RT-PCR on both human testis and ovary RNA. This RT-PCR successfully generated an additional approximately 155 bp of 5' human APON-like cDNA sequence. The human APON-like sequence has been deposited within the NCBI database as GenBank accession no. AY583020. Significantly, the human APON-like sequence lies adjacent to the APOF gene on chromosome 12. Furthermore, the APON-like gene sequence, in common with the APOF gene, possesses two exons, the second of which contains the entire protein coding region.
Although the human APON-like cDNA sequence was found to have very high sequence identity with the bovine and porcine cDNAs, upon translation of the human cDNA very little homology was predicted. A 20-bp insertion resulted in a frame shift and the introduction of a stop codon, with the result that the human APON-like mRNA was predicted to produce a protein of only 72 amino acids with only partial homology to bovine ApoN. The insertion and the subsequent premature truncation were also seen in the publicly accessible gDNA sequence, thus confirming the veracity of the human cDNA sequence.
Attempts to amplify mRNAs/cDNAs transcribed from the region of human chromosome 12 with lesser homology (at both an mRNA and predicted protein level) to bovine and porcine ApoN failed to amplify an APON-like sequence from several tissues, including testis and ovary, despite the use of several sets of nested PCRs capable of discriminating between the two potential APON-like sequences from cDNA (data not shown). This suggested that the APON-like sequence was the only such sequence in the human transcriptome. The absence of an alternative APON gene within the human genome was confirmed using Southern blotting on human gDNA, which revealed two bands only, with sizes consistent with those generated from the two APON-like genes described above (data not shown). At the time of writing this manuscript, no human ESTs (other than APOF) with high levels of homology to the bovine or porcine ApoN sequence had been deposited in any publicly accessible database.
ApoN in lipoprotein fractions
To establish whether ApoN was an integral lipoprotein component, bovine plasma and follicular fluid were separated into their various lipoprotein fractions. The yields of protein for the various lipoprotein fractions from plasma were: HDL, 70 mg/ml; LDL, 0.14 mg/ml; VLDL, 0.12 mg/ml. The protein yields from bFF were: HDL, 3.06 mg/ml; LDL, 0.01 mg/ml; VLDL, 0.031 mg/ml. Equal amounts, on a protein basis, of each lipoprotein fraction, lipoprotein-depleted plasma, and bFF were subjected to Western blot analysis. Western blotting of bovine plasma lipoproteins with the anti-ApoN (anti-BL1) serum revealed a weakly immunoreactive band of approximately 12 kDa in the HDL fraction. Bands were not observed in either the LDL or VLDL fractions, nor in lipoprotein-depleted plasma (Fig. 6A
). In bFF fractions, ApoN was detected in association with both HDL and LDL, but not in association with VLDL, nor was it detectable in the lipoprotein-depleted bFF (Fig. 6B
). As predicted by the database searching and cloning data, no specific bands were detected in any lipoprotein fractions of human plasma (data not shown).
ApoN tissue expression
ApoN mRNA was detected by RT-PCR in bovine ovary, liver, skeletal muscle, and uterus (Fig. 7
). ApoN was not detected in heart, placenta, kidney, spleen, or thymus tissue by this method. It is of note that the RT-PCR on cDNA from skeletal muscle resulted in two bands, the shorter of which corresponded to ApoN. The sequence of the longer band bore no identity to ApoN and was thus likely a product of nonspecific priming.
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| Discussion |
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Production of apolipoproteins by the ovary is not unexpected. Most notably, ApoE is synthesized in both the ovary (33, 34) and testis (35, 36), where it has been shown to play a number of roles in gonadal physiology. Based on the available data, however, the biological activity of ApoN cannot be inferred from its partial homology with ApoF. The active fragment of ApoF and the lipoprotein-associated portion of ApoN, are both C-terminal fragments of a specific cleavage event, with the products having almost no sequence homology (12, 13). The homology between the N-terminal fragments of ApoF and ApoN may indicate a common protein processing or anchoring mechanism. Nonetheless, the association between ApoN and HDL/LDL in follicular fluid and serum may be indicative of biological activity associated with cholesterol and/or fatty acid transport, and ultimately in gonadal steroidogenesis. Finally, several lipoproteins and apolipoproteins have been shown to have immunosuppressive activities, particularly the ApoE-rich LDLs (14, 37). Although HDLs generally have not been associated with immunoregulatory activity, transthyretin itself has been reported to inhibit production of IL-1 by monocytes and endothelial cells (38). Consequently, the distribution of ApoN in the epithelia of several immunoprivileged tissues (i.e. the testis, ovary, placenta, uterus, and the anterior chamber of the eye) and in macrophages and neutrophils, may indicate some role for ApoN in immunoregulation. Proof of this hypothesis, however, requires further experimentation.
Despite extensive searching using a number of techniques, there does not appear to be a functional human ortholog of ApoN. A gene with a high level of sequence homology to both bovine and porcine ApoN cDNA, and the predicted mouse cDNA, is clearly present on human chromosome 12 in a region syntenic to the position of the putative mouse ApoN ortholog (UniGene Mm30121). The human APON-like gene is transcribed to mRNA in at least the human testis and ovary. The presence of an insertion within the sequence, however, means that the predicted translation product would share little homology with the bovine ApoN protein sequence and would be prematurely truncated by the introduction of a frame shift derived stop codon. Significantly, the human APON-like sequence lies adjacent to the APOF gene on chromosome 12. Furthermore, the APON-like gene sequence, in common with the APOF gene, possesses two exons, the second of which contains the entire protein coding region. These data, and the moderate level of homology between the N-terminal fragment of both APOF and APON, suggest that the APON gene arose as an APOF gene duplication event (or vice versa), but the C-terminal fragments in particular progressively diverged during evolution. At some time subsequent to the divergence of a common ruminant and primate ancestor, however, the human APON-like gene acquired frame shift mutations, which effectively resulted in the ablation of human APON.
In summary, the above data clearly identify the second member of the ApoF-related protein family in a number of species and its association with HDL, and with LDL in ovarian follicular fluid. Although the precise functions of ApoN remain to be determined, a role in either the regulation of steriodogenesis or immunosuppression is suggested by its molecular characteristics and distribution.
| Acknowledgments |
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| Footnotes |
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Received May 17, 2004.
Accepted for publication July 8, 2004.
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