Endocrinology, doi:10.1210/en.2003-0930
Endocrinology Vol. 145, No. 4 1898-1905
Copyright © 2004 by The Endocrine Society
The Adrenal Secretory Serine Protease AsP Is a Short Secretory Isoform of the Transmembrane Airway Trypsin-Like Protease
Immo A. Hansen,
Martin Fassnacht,
Stefanie Hahner,
Fabian Hammer,
Markus Schammann,
Susanne R. Meyer,
Andrew B. Bicknell and
Bruno Allolio
Endocrinology and Diabetes Unit (I.A.H., M.F., S.H., F.H., M.S., S.R.M., B.A.), Department of Medicine, University of Wuerzburg, D-97080 Wuerzburg, Germany; and School of Animal and Microbial Sciences (A.B.B.), The University of Reading, Whiteknights, Reading, Berkshire RG6 6AJ, United Kingdom
Address all correspondence and requests for reprints to: Immo A. Hansen, Department of Entomology, Watkins Drive, University of California, Riverside, California 92521. E-mail: immoh{at}citrus.ucr.edu.
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Abstract
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To further elucidate the role of proteases capable of cleaving N-terminal proopiomelanocortin (N-POMC)-derived peptides, we have cloned two cDNAs encoding isoforms of the airway trypsin-like protease (AT) from mouse (MAT) and rat (RAT), respectively. The open reading frames comprise 417 amino acids (aa) and 279 aa. The mouse AT gene was located at chromosome 5E1 and contains 10 exons. The longer isoform, which we designated MAT1 and RAT1, has a simple type II transmembrane protein structure, consisting of a short cytoplasmic domain, a transmembrane domain, a SEA (63-kDa sea urchin sperm protein, enteropeptidase, agrin) module, and a serine protease domain. The human homolog of MAT1 and RAT1 is the human AT (HAT). The shorter isoform, designated MAT2 and RAT2, which contains an alternative N terminus, was formerly described in the rat as adrenal secretory serine protease (AsP) and has been shown to be involved in the processing of N-POMC-derived peptides. In contrast to the long isoform, neither MAT2 and RAT2 (AsP) contain a transmembrane domain nor a SEA domain but an N-terminal signal peptide to direct the enzyme to the secretory pathway. The C terminus, covering the catalytic triad, is identical in both isoforms. Immunohistochemically, MAT/RAT was predominantly expressed in tissues of the upper gastrointestinal and the respiratory tractbut also in the adrenal gland. Moreover, isoform-specific RT-PCR and quantitative PCR analysis revealed a complex expression pattern of the two isoforms with differences between mice and rats. These findings indicate a multifunctional role of these proteases beyond adrenal proliferation.
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Introduction
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SERINE PROTEASES of the trypsin family are involved in many diverse physiological processes such as food digestion, blood coagulation, activation of complement, fertilization, defense against pathogens, cell signaling and development (1, 2) and have well-recognized roles in the pathology of diseases such as cancer (3). Recently, a serine protease in the rat adrenal gland was described, which is up-regulated during compensatory adrenal growth in the contralateral gland after unilateral adrenalectomy (4, 5, 6). It consists of a 28-kDa protein containing a secretory signal sequence together with the classical His/Asp/Ser catalytic triad and was, therefore, named the adrenal secretory serine protease (AsP). Based on the concept of Lowry and co-workers (7, 8, 9, 10) that the N-terminal proopiomelanocortin (N-POMC) regulates adrenal proliferation, AsP has been proposed to play a key role in this regulation process by specifically cleaving an N-terminal fragment of POMC (174 N-POMC) to generate a smaller peptide acting as an adrenal mitogen. Accordingly, in a recent study, we demonstrated the mitogenic activity of 128 POMC in vitro (11). In keeping with this concept, AsP is expressed in the outer rat adrenal cortex, the site of cell proliferation and was also found in a mouse adrenocortical cancer cell line (Y1 cells). Expression of antisense AsP RNA in Y1 cells reduced their growth rate, suggesting that AsP may also play a crucial role in neoplastic adrenal growth (4). Although an exhaustive survey has not been performed, AsP expression appeared to be limited to adrenal cells.
Comparison of the AsP sequence with that of other members of the trypsin family revealed high homology to the HAT [human airway trypsin-like protease (AT)]. However, HAT is considerably larger than AsP and contains an N-terminal transmembrane domain not shared by AsP. As the HAT gene does not appear to encode for the unique N-terminal portion of AsP, it was concluded that AsP is encoded by a different gene.
To further clarify this issue, we have characterized the gene encoding AsP in mouse and rat and have analyzed the expression profile of the gene products. The results demonstrate that the respective genes in rat and mouse code for both, a short secretory protease as well as a long isoform with a transmembrane and a SEA (63-kDa sea urchin sperm protein, enteropeptidase, agrin) domain. The long isoform is, indeed, the rodent homolog of HAT.
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Materials and Methods
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Animals
Adult male CD-1 mice and Wistar rats were purchased from Charles River Breeding Laboratories (Sulzfeld, Germany). Animals were kept in standard laboratory conditions with a 12-h light, 12-h dark cycle. All efforts were made to minimize both the suffering and number of animals used and all procedures were performed according to the accepted standards of animal care.
Isolation of RNA from solid tissues and blood
Total RNA was isolated by means of a commercially available modification (TRIzol; Invitrogen, Karlsruhe, Germany) of the one-step phenol/guanidinium thiocyanate method (12). Polyadenylated (PolyA+) RNA was isolated using the Oligotex mRNA Mini Kit (QIAGEN, Hilden, Germany). For the isolation of polyA+ RNA from total blood, we used the mRNA Isolation Kit for Blood/Bone Marrow (Roche, Mannheim, Germany). RNA amounts were determined by measuring the OD260 and quality was checked on agarose gels containing formaldehyde.
Rapid amplification of 5'- and 3'-cDNA ends (RACE)
RACE was performed using the simple modular architecture research tool (SMART) RACE cDNA Amplification Kit (CLONTECH, Alameda, CA) following the manufacturers instructions. PolyA+ RNA (0.5 µg) was used as starting material. The synthetic oligonucleotides used as primers for RACE-PCRs are depicted in Table 1
. RACE products were analyzed in 1.5% agarose gels. Isolated bands were cut out of the gel, agarose was removed using Ultrafree-DA spin columns (Millipore, Eschborn, Germany). The cDNAs were introduced into the PCR-TOPO vector (Invitrogen, Karlsruhe, Germany) following the manufacturers instructions. Sequencing was performed by TOPLAB (Martinsried, Germany).
RT-PCR
The reactions were carried out using total RNA (250 ng) as template and the QIAGEN OneStep RT-PCR Kit (QIAGEN) according to the manufacturers instructions. The synthetic oligonucleotides used as primers for RT-PCR are depicted in Table 1
. RT-PCR was performed as follows, using a Mastercycler gradient (Eppendorf, Hamburg, Germany): 30 min of 50 C (room temperature), 15 min of 95 C inactivation of the reverse transcriptase and activation of Taq polymerase, followed by 40 cycles of 94 C for 1 min, 60 C for 1 min and 72 C for 2 min. The PCR products were analyzed in 1.5% agarose gels stained with ethidiumbromide.
Quantitative analysis of mouse AT (MAT) and rat AT (RAT) mRNA expression [quantitative PCR (QPCR)]
Total RNA was isolated form various tissues using TRI reagent (Sigma, Deisenhofen, Germany). Contaminating genomic DNA was removed by deoxyribonuclease I treatment and the RNA was repurified using TRI reagent. Two and half micrograms of the RNA were used to synthesize single-stranded cDNA using the ReverseIT kit (ABgene, Epsom, UK) in a 20-µl reaction using random hexamers as primer. The resulting cDNA was diluted to 100 µl and 1 µl used in each subsequent PCR. Specific Taqman probes and primer sets were designed using Primer Express (Applied Biosytems, Foster City, CA). The sequences of the primers and probes used were as follows: MAT1: Forward (5' CCA ATG CTA TCA CCG TCA AGA TT 3'); Reverse (5' GCC AGG AGC CCT ACC GTT AT 3'); Probe (5' FAM TTC ACT CCC TTT GCA GTA GCT TTC GTT GTC TAMRA 3'). MAT2: Forward (5' CTG AGA GCC AGG TGA AAT GAT TT 3'); Reverse (5' TGG TCA GTG AGT GCT ATC ATT AAG AA 3'); Probe (5' FAM CAG CTT CTG TTT TGT TGA TTT TGT TCT CAC CTT TT TAMRA 3'). RAT1: Forward (5' TCC TCC TTT GGC TTC AGG TAC A 3'); Reverse (5' TGT CCG TCC TAC TGC TTT GAG A 3'); Probe (5' FAM AGA ACA CGA AAG AGT CAT TCA GTT GAG AGG GA TAMRA 3'). RAT2: Forward (5' CAT GAA ATC AGG GTG AAA TGA GTT 3'); Reverse (5' CAG TGA GTG CTA GCG TTA AGA AAG A 3'); Probe (5' FAM CAG CTT CTG TTT TGT TGA TCT TCT TCT CGT GC TAMRA 3'). All primers and probes were synthesized by Sigma-Genosys (Pampisford, UK). Reactions were set up in triplicate in a total of 25 µl using QPCR ROX master mix (ABgene) following the manufacturers instructions and cycled in an ABI PRISM 7700 Sequence Detector under the following conditions: initial denaturation/activation of polymerase at 95 C for 15 min and then 40 cycles of 95 C for 15 sec and 60 C for 1 min. Expression levels of each variant were determined by comparison to standard curves generated using a 10-fold serial dilution of synthetic template containing the sequence of the complete amplicon. All results were normalized to expression of glyceraldehyde-3-phosphate dehydrogenase (GAPDH). The level of GAPDH expression in each tissue was assessed using a commercial primer/probe set following the manufacturers instructions (Applied Biosytems). Relative expression levels were calculated by comparison to a standard curve.
Immunohistochemistry
We used the recently described polyclonal rabbit antibody raised against the peptide DQDTENVLTQECGARPDLITLSEER corresponding to residues 2347 of the full-length translated product of AsP (4). This peptide is part of both protease isoforms found in this study and is 100% conserved between mouse and rat. Therefore, this antibody recognizes both protease isoforms in both, mouse and rat. Longitudinal cryosections (10 µm) of mouse and rat embryos and mouse tongue and esophagus were blocked at room temperature for 2 h with 3% normal goat serum in 0.5x PAT (1x NaCl/Pi, 1% albumin, 0.5% Triton X-100) and then incubated overnight at 4 C with anti-AsP IgG (10 µg·µl-1 in 0.5x PAT). After three washes with NaCl/Pi, the sections were incubated for 2 h at room temperature with a Cy2 (cyanine 2-OSu bisfunctional)-conjugated affinity-purified goat antirabbit IgG (1:50; Rockland, Gilbertsville, PA) in 0.5x PAT. After being thoroughly washed, the sections were analyzed under a fluorescent microscope (Leica, Solms, Germany) and photographed with a Pixera charge-coupled device camera. The specificity of the MAT immunoreaction was verified by omitting the primary antibody and by using the peptide described above, as blocking peptide. We incubated 100 µg of peptide with MAT antibody (1:500) in a total volume of 500 µl for 2 h at room temperature before addition to the section.
Nucleotide and amino acid sequence analysis
Genome searches were performed using basic local alignment and search tool (BLAST) (13) at the National Center for Biotechnology Information databases (http://www.ncbi.nlm.nih.gov/), sequence similarities were studied using ClustalW (14) at European Molecular Biology Laboratory (EMBL) (http://www2.ebi.ac.uk/clustalw/), analysis of the modular domain architecture of proteins was performed with SMART (15) at EMBL (http://smart.embl-heidelberg.de/).
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Results
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Isolation and nucleic acid sequence analysis of MAT and RAT cDNA clones
We used the published sequence of the rat AsP cDNA to perform a nucleotide blast (BLASTN) sequence analysis using the public domain GenBank sequence database. A mouse enhanced sequence tag (EST) clone, isolated from lung tissue, (dbEST BF143606) and genomic sequences of the mouse, very similar to the rat AsP, were identified. The EST clone was completely sequenced (Medigenomix, Martinsried, Germany). It encodes the mouse homolog of the HAT and shows a strong homology to rat AsP only in the C-terminal region. We named this protein MAT1. Based on the hypothesis that the AT gene of the mouse encodes a long, HAT-like and a shorter, AsP-like, isoform, we used RNA from the trachea and the adrenal gland of mouse and rat for the following experiments. RACE analysis was performed to obtain 5' and 3' ends of the cDNAs with primers depicted in Table 1
. The sequences which we obtained were used to develop primers to amplify the full-length cDNAs of two different isoforms. A short isoform was amplified from adrenal- and a longer isoform from trachea RNA from both mouse and rat, respectively. We named the shorter protease isoform of the mouse MAT2, the longer isoform of the rat RAT1, and the shorter isoform of the rat, which is identical with the previously described AsP, RAT2. The sequences of the full-length cDNA clones were published in GenBank. Accession numbers are as follows: MAT1, AF448809; MAT2, AF539752; RAT1, AF453776.
Organization of the MAT gene
Comparison of the MAT1 and MAT2 cDNAs with the mouse genomic sequence using a BLAST homology search against the GenBank revealed that the MAT gene is located on the long arm of chromosome 5 at position E1 (GenBank accession no. NT_039307.1). It is composed of 10 exons and 9 introns, and spans about 70 kb (Fig. 1
). The GT-AG rule for exon-intron boundaries is conserved. Interestingly, two similar genesdifferentially expressed in squamous cell carcinoma (DESC) 1 and DESC2encoding other trypsin-like proteases of the mouseare also found on the long arm of chromosome 5 at position E1. The DESC genes have the same exon/intron organization as the AT gene (data not shown), suggesting that these genes are the result of a gene duplication.

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FIG. 1. Structures of gene and deduced amino acid sequences, of MAT. Comparison of the nucleotide sequence of the MAT cDNA and the genomic sequence of chromosome 5E1 revealed the structure of the AT gene. The 10 exons are boxed, and the intervening sequences are not shown except for the exon/intron boundaries. Exon 6 contains an internal splicing site, which is used when the long isoform MAT1 is transcribed (lower box only). In case of the short isoform (MAT2), the complete exon 6 is used as the first exon (both boxes). The exon/intron boundary consensus sequence (GT/AG) is double underlined, the poly(A) signal is in bold and single underlined. Amino acids of the long isoform are numbered starting from the putative first initiating Met in exon 1; the amino acids of the short isoform are numbered with italic ciphers starting from the first putative initiating Met in exon 6. The essential triad is indicated by black triangles, the putative activation site is indicated with a white triangle, the SEA module and the transmembrane domain are indicated with gray and black shaded letters, respectively. The cysteine residues 173 and 291, which establish a conserved disulfide bond, linking the pro- and the catalytic domain, are circled. The disulfide bond is indicated by a dotted line.
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Structural characterization of the Mus musculus AT isoforms
The full-length MAT1 cDNA sequence is 2043 nucleotides in length (built of exons 110) and comprises an open reading frame of 417 aa with a putative initiation codon at position 36. An A at position -3 from the start ATG fulfils the general Kozak rule for efficient translation (16, 17). The aa sequence shows strong identity (66%) with the HAT and the human DESC1 (37%) (Fig. 2
).

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FIG. 2. A, Derived amino acid alignment of MAT1, RAT1, and HAT with the human SEA domain containing serine protease DESC1. Completely conserved amino acids marked with * are in white letters; dashes represent gaps. Amino acids that are part of the catalytic triad are marked with a black arrow, the amino acids flanking the catalytic serine at position -6, 15, 16, 17, and 28, which determine the specificity of the substrate binding pocket are marked with white arrows. The predicted transmembrane regions are boxed. GenBank accession numbers of the sequences used: RAT, AAL50817; MAT, AAL47139; HAT, O60235; hDESC1, Q9UL52. B, Overall identity (%) of the aligned proteases.
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MAT1 is a type II transmembrane serine protease (13) and possesses four structural regions (Fig. 3
). The hydropathy plot (Fig. 3A
) shows an N-terminal cytoplasmic region of 20 aa. It is followed by a hydrophobic transmembrane domain of 20 aa and a 145 aa stem region containing a SEA module (18). The serine protease domain of 232 aa with strong conservation of the amino acids surrounding the catalytic triad (His/Asp/Ser) is located at the C terminus (Fig. 3B
). A putative cleavage site for proteolytic processing required to generate a mature form (Fig. 1
) is tentatively assigned between Arg185 and Ile186, which is a highly conserved activation motif of serine proteases. A disulfide bridge linking the SEA module with the catalytic domain seems to be formed between Cys172 and Cys291, which are also conserved between type II transmembrane serine proteases (TTSPs) (19). MAT1 is likely to remain membrane bound after activation.

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FIG. 3. A, Hydropathy plot of the deduced amino acid sequence of MAT1 and MAT2. The method of Hopp and Woods (52 ) was used (http://us.expasy.org/cgi-bin/protscale.pl). Hydrophobic residues show negative values, whereas hydrophilic residues show positive values. B, Schematic illustration of the structural comparison of the MAT isoforms. The amino acid number is indicated below each domain; exon boundaries are indicated with black, vertical bars. Amino acids belonging to the essential catalytic triad (H, D, S) are marked with white triangles; a possible cleavage and activation site is marked with a black triangle. CT, Cytoplasmic tail; SEA, SEA module; SP, signal peptide; TM, transmembrane domain.
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The full-length MAT2 cDNA consists of 1626 nucleotides (build of exons 610 with an alternative transcriptional start point) and comprises an open reading frame of 279 aa (Fig. 1
). The putative initiation codon is at position 88. The sequence surrounding the start ATG does not contain the Kozak consensus sequence.
MAT2 possesses three structural regions (Fig. 3
). A hydrophobic signal peptide of 24 aa, which is supposed to direct the protein to the secretory pathway, is followed by a 23-aa linker peptide and the 232-aa catalytic domain. In this isoform, the cysteine residues forming the disulfide bridge, connecting the linker peptide with the catalytic domain, are in positions 34 and 153. The cleavage and activation site is between Arg47 and Ile48.
Both isoforms in all three AT-like proteases (MAT, RAT, HAT) share exons 710 and therefore have identical catalytic domains. The residues -6, 15, 16, 17, and 28 relative to the active serine are thought to determine the specificity of the substrate binding pocket in several serine proteases (20). All these positions are conserved in the ATs between the species examined, except position 15, where the human AT (HAT) features an Ile instead of Val (mouse, rat). The aspartic acid residue at position -6 from the catalytic serine is known to confer specificity for basic residues (20, 21).
Structural characterization of the Rattus norvegicus AT-like protease isoforms
The structural organization of the AT isoforms of the rat (R. norvegicus)RAT1 and RAT2 (AsP)is identical with the mouse protease isoforms described above.
Differential expression of MAT and RAT isoforms
RT- and QPCR data.
The expression pattern of the two isoforms was investigated by nonquantitative RT-PCR and by QPCR in various tissues of mice and rats. Using RT-PCR with primers specific for the long isoform, MAT1 was detected in the esophagus, lung, stomach, tongue, and trachea of mice (Fig. 4A
, upper panel). There was also significant MAT1 mRNA expression in blood, brain, cerebellum, gut, heart, and spinal cord. These results were confirmed by QPCR (Fig. 4
, A and B). Notably high amounts of MAT1 mRNA were detected in esophagus, tongue, and trachea, whereas small amounts were found in heart, lung, and adrenal gland. A similar expression pattern was found for MAT2. However, the relative abundance of MAT2 mRNA is distinctly lower than that of MAT1 expression (Fig. 4B
)

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FIG. 4. Specific distribution of MAT and RAT isoforms in various tissues of mouse and rat. A, RT-PCR analysis of the tissue distribution of MAT1/MAT2 in murine tissues. B, QPCR analysis of relative levels of MAT1/MAT2 mRNA in different tissues. C, RT-PCR analysis of the tissue distribution of RAT1/RAT2 in rat tissues. D, QPCR analysis of relative levels of RAT1/RAT2 mRNA in different tissues. All probes in RT-PCR were positive for ß-actin. As template, 500 ng of total RNA were used (exception in blood, when 50 ng polyA+ RNA served as template). Normalization in quantitative PCR was performed with GAPDH. ag, Adrenal gland; br, brain; cb, cerebellum; oe, esophagus; gt, gut; ht, heart; kd, kidney; ms, mussel; lg, lung; lv, liver; pg, pituitary gland; sc, spinal cord; st, stomach; tg, tongue; tr, trachea; y1, Y1 cells; -, no RNA.
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The long AT isoform of the ratRAT1was found in the esophagus, tongue, and trachea using RT-PCR (Fig. 4C
, upper panel). A faint band was obtained with RNA from the pituitary and no bands were found in adrenal gland, blood, brain, cerebellum, gut, heart, kidney, lung, liver, spinal cord, and stomach. QPCR analysis of MAT1 expression showed relatively high amounts of MAT1 mRNA in RNA derived from tongue, and lower levels in adrenal gland, pituitary gland, esophagus, lung, and trachea (Fig. 4D
). In contrast, RAT2 (AsP) was mainly expressed in the adrenal gland as well as the tongue and showed also expression in the heart (Fig. 4
, C and D). The relative amount of RAT2 mRNA in pituitary, esophagus, lung, and trachea was comparable to RAT1.
Immunohistochemistry.
Detailed immunohistochemical analysis of mouse embryonic and adult cryosections revealed many tissues to be positively stained (Fig. 5
). Strong immunoreactivity was detected in adult tongue surface epithelium (Fig. 5
, A and B) and the esophagus surface epithelium (Fig. 5
, D and E). Staining of single cells was detected in adult trachea (Fig. 5F
), embryonic lung (Fig. 5G
), in the embryonic mouse gut (Fig. 5H
). Weak staining was observed in the outer adrenal cortex region of adult mice (Fig. 5I
). A similar pattern of immunoreactivity was detected in rat cryosections (data not shown). Preincubation of the antibody with the peptide used for immunization completely abolished immunoreactivity as shown in a tongue section in Fig. 5C
.

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FIG. 5. Immunohistochemical localization of MAT in various mouse tissues. The antibody used is raised against a sequence common to both isoforms of the protease. A, Cross section of the tongue of an adult mouse (100-fold magnification). Unstained papilla at the upper surface of the tongue are marked with white arrowheads. B, Detail of panel A, 400-fold magnification. C, Cross section of the tongue: the antibody was preincubated with a blocking peptide (400-fold magnification). D, Cross section of the esophagus of an adult mouse (400-fold magnification). E, Longitudinal section of the esophagus of an adult mouse (400-fold magnification), F, Longitudinal section of the trachea of an adult mouse (400-fold magnification). tc, Tracheal cartilages. G, Lung tissue of a mouse embryo, 23 d after fertilization (400-fold magnification). H, Cross section of the gut of a mouse embryo, 23 d after fertilization (400-fold magnification). I, Cross section of the adrenal gland of an adult mouse (200-fold magnification). zg, Zona glomerulosa; zf, zona fasciculata.
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Discussion
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In this study, the mouse and rat homologs of the HAT gene were characterized. Two different cDNAs were identified in both mouse and rat, encoding two different protease isoforms with significant structural differences and different expression patterns. One of these isoforms has been described previously in the rat as AsP (4).
We designated the long isoform MAT1 and RAT1, respectively, according to the human homolog HAT. These proteases exhibit the typical organization of TTSP: a short cytoplasmic tail at the N terminus followed by a transmembrane domain, a stem region, and the catalytic domain.
Whereas enteropeptidase, the first member of the family of TTSPs, was discovered nearly a century ago (22), only in recent years a rapidly growing number of TTSPs have been cloned including hepsin (23), HAT (24), corin (25), membrane-type serine protease 1 (MT-SP1) (26), matriptase (27), TMPRSS2 (28, 29), TMPRSS3 (30), seprase (31), TADG12 (32), TADG15 (33), Spinesin (34), DESC1 (35), and DESC2 and DESC3 (3). TTSPs differ in the structural organization of the modular stem region (19). In this region, MAT1/RAT1/HAT carry a so called SEA module. So far, only four other known members of the TTSP family carry a SEA module: enteropeptidase and DESC1, DESC2, and DESC3 (3, 36). The SEA module is an extracellular domain found in a variety of proteins (18). It was named after the first three proteins with an identified SEA module. All proteins containing a SEA module appear to be heavily glycosylated. In addition, the better characterized proteins all contain O-glycosidic-linked carbohydrates such as heparan sulfate that contribute considerably to their molecular masses. The common module might regulate or assist binding to neighboring carbohydrate moieties (18). On the other hand, the SEA module is a protein cleavage site of several transmembranous proteins (36). It was hypothesized that all membrane residing proteins containing a SEA module will undergo proteolytic cleavage and thereby generate ligand-receptor alliances (37). However, this may not be true in the case of MAT1 and RAT1 because the typical cleavage signal GSVVV, which is highly conserved in other SEA-containing proteins (38), is missing. Whereas enteropeptidase has a complex domain structure in the stem region [from the N terminus: SEA module, LDLa domain, CUB domain, MAM domain, CUB domain, LDLa domain, SR domain, trypsin-like serine protease domain (39)], DESC proteases have an identical structure as MAT1/RAT1/HAT because their stem regions carry only the SEA domain. As the murine DESC proteases are also located on the long arm of chromosome 5 and exhibit the same exon/intron organization it is, therefore, likely that these genes are the result of a gene duplication.
The shorter cDNA derived from the MAT/RAT gene by alternative transcription MAT2/RAT2 (AsP)encodes a secretory protease that was recently described as AsP (4, 5). The usage of alternative initial exons is a well-known phenomenon: in a recent study, a full-length mouse cDNA collection was compared with the draft of the mouse genome. It was shown that 31% of the genes with splice variation have alternative initial exons (40). However, only a few other reports have described genes of the TTSP family which encode both, a membrane spanning and a secretory isoform of a protease (41, 42).
MAT2 and RAT2 (AsP) contain a typical signal peptide, indicating that they are secretory proteins. However, it was shown that RAT2 (AsP) is retained on the surface of the cell after secretion (4, 40). It was suggested, that the high density of arginine residues on the posterior face of the active site anchors the enzyme to the cell surface. Also truncated human MT-SP1 lacking cytoplasmic and transmembrane domains remains bound to the cell surface of COS cells. It was suggested that this localization may be mediated via an interaction between MT-SP1 and another cell surface protein (40, 43). Interestingly, the HAT-like protease gene does not encode a short protease isoform. The unique sequence, encoding the N terminus of MAT2/RAT2 (AsP) has an equivalent in the human HAT gene. However, the insertion of 8 bp causes a frame shift and introduces a stop codon. All of our attempts to identify shorter HAT cDNAs in various human tissues by 5'-RACE PCR failed. Only the long isoform was demonstrated in cDNA from human trachea and adrenal gland (Hansen, I. A., unpublished results). Therefore, the existence of the short isoform is a true difference between man and mouse, and this raises the question whether the short isoform was lost during human evolution or represents a new development in rodents.
Our study indicates that the expression of MAT1/2 is more widespread than suggested from previous reports on the expression of HAT and AsP (4, 44). We used two methods to determine which tissues express which protease isoforms. The results of our RT- and QPCR experiments confirm each other for the most part with only two exceptions: in mouse esophagus and rat trachea, the short isoform was not detected by RT-PCR but found in the QPCR experiments (Fig. 4
). In general, significant expression of the AT gene was observed in parts of the upper gastrointestinal tract (e.g. tongue, esophagus) and also in trachea and lung tissue with clear species differences between rat and mouse. Most notably, the short isoform [MAT2, RAT2 (AsP)] is highly expressed in the adrenal gland of the rat, whereas it is only expressed in relatively low levels in mouse tissue. The same is true for heart tissue. In a previous study, RAT2 (AsP) was also found in the pituitary gland of rats (45). Here we show that this is true for both isoforms in rat, whereas no AT expression could be detected in mouse tissue. Although MAT1/RAT1 is clearly expressed in rodent trachea suggesting a function similar to HAT, it is also found in the upper gastrointestinal tract and other tissues clearly indicating that its physiological role is not restricted to its production by ciliated cells of the bronchial epithelium.
The function of MAT1/RAT1 remains to be fully elucidated. The human homolog HAT has been isolated from mucoid sputum of patients with chronic airway disease (24). HAT has been reported to degrade fibrinogen, and it was suggested that it may play some role in the local host defense system of the upper airways (46). More recent data have shown that HAT may also activate protease-activated receptor 2 (PAR2) (47). PAR2 belongs to the family of protease activated G protein-coupled receptors (PAR14), which are activated by proteolytic exposure of an occult-tethered ligand (48, 49). PAR2 has been found to be activated by various proteases including trypsin, tryptase, and factor Xa. Moreover, PAR2 receptors are not only involved in airway physiology but have also been detected in a large number of other tissues including the adrenals, serving variable functions and potentially providing a target for HAT action outside the respiratory tract. In a recent study, it was demonstrated that RAT2 (AsP) specifically cleaves 174 N-POMC to generate a shorter adrenal mitogen and that inhibition of AsP expression reduces growth of mouse adrenal Y1 cells (4, 5). However, it is now clear that expression of the adrenal secretory serine protease (RAT2) is not restricted to the adrenal gland. This raises the question of a specific role of 174 N-POMC cleavage for mitogenesis in the adrenal gland because such cleavage may also occur in other tissues. Moreover, the expression of RAT2 (AsP) on the surfaces of esophagus and tongue indicates additional functions of the AsP beyond N-POMC cleavage.
Interestingly, melanocortin receptor expression has been found in exocrine glands, adrenal glands, and other peripheral organs of rodents (50, 51). In rat esophagus and adrenal glands, the expression pattern of MC5R overlaps with the ones we found for ATs. Thus, cleavage of N-terminal POMC peptides may occur in tissues other than adrenal gland, and this raises the question of which function these peptides have beyond the regulation of adrenal growth.
In summary, we have identified the gene encoding MAT, which encodes two different protease isoforms. Because of the specific tissue distribution of the enzyme and the complex expression pattern of its isoforms, it appears that MAT/RAT is a multifunctional protein, involved in various physiological processes. In particular, we provide evidence that the role of RAT2 (AsP) extends beyond adrenal mitogenesis.
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Acknowledgments
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We acknowledge Geoffrey M. Attardo for language editing this manuscript.
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Footnotes
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This work was supported by Deutsche Forschungsgemeinschaft (Al 203/7-3,4).
Abbreviations: aa, Amino acid, AsP, adrenal secretory serine protease; AT, airway trypsin-like protease; BLAST, basic local alignment and search tool; DESC, differentially expressed in squamous cell carcinoma; EST, enhanced sequence tag; GAPDH, glyceraldehyde-3-phosphate dehydrogenase; HAT, human airway trypsin-like protease; MAT, murine AT; MT-SP1, membrane-type serine protease 1; N-POMC, N-terminal POMC; PAR, protease-activated receptor; PolyA+, polyadenylated; POMC, proopiomelanocortin; QPCR, quantitative PCR; RACE, rapid amplification of cDNA ends; RAT, rat AT; SEA, 63-kDa sea urchin sperm protein, enteropeptidase, agrin; SMART, simple modular architecture research tool; TTSP, type II transmembrane serine protease.
Received July 24, 2003.
Accepted for publication December 17, 2003.
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References
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