| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
Laboratory of Neurochemistry (N.M., T.S., H.G.), National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, Maryland 20892; Department of Medicine (J.G.V.), Division of Endocrinology and Metabolism, Georgetown University, Washington, D.C. 20007; and Laboratory of Genetics (C.C.X., M.J.B.), National Institute of Mental Health, National Institutes of Health, Bethesda, Maryland 20892
Address all correspondence and requests for reprints to: Harold Gainer, Ph.D., Laboratory of Neurochemistry, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, Maryland 20892. E-mail: gainerh{at}ninds.nih.gov.
| Abstract |
|---|
|
|
|---|
| Introduction |
|---|
|
|
|---|
Several changes have been associated with hypoosmolality. One is down-regulation of the expression of multiple genes in the magnocellular neurons (MCNs) of the SON during periods of low synthesis and secretion of VP and OT (23, 24). The second is the up-regulation of expression of genes that might be involved in the active inhibition of VP and OT synthesis, storage, and secretion. To the best of our knowledge, the glucocorticoid receptor (25) and the estrogen receptor ß (21) are the only genes that have been shown to be up-regulated during chronic hypoosmolality. When we previously screened cDNA libraries for genes that were differentially expressed in the HNS during chronic hyperosmolality and hypoosmolality, we failed to detect any genes that were up-regulated in the hypoosmolar condition (23), but such screening methods are far from comprehensive. Therefore, we decided to employ DNA microarrays and laser-microdissected SON samples (26) to look for changes in gene expression induced by hypoosmolality. Using this approach, we identified 4959 genes with statistically significant differences in expression between normosmolar control and hypoosmolar SONs, with 1564 of these differing in expression by more than 2-fold. These genes serve a wide variety of functions, and most were up-regulated in gene expression in hypoosmolar compared with control SONs. Of these, 90 were preferentially expressed in the SON, and 44 coded for transcription-related factors, of which 15 genes were down-regulated and 29 genes were up-regulated in the hypoosmolar rat SONs. These results indicate that the hypoosmolar state is accompanied by a global, but selective, increase in expression of a wide variety of regulatory genes, which could be involved in the MCN's adaptation to sustained hypoosmolality.
| Materials and Methods |
|---|
|
|
|---|
Induction of hyper- and hypoosmolality
To induce hyponatremia, male rats were given 1-desamino-[8-D-arginine]-VP (dDAVP; Aventis Pharmaceuticals, Bridgewater, NJ) at a rate of 5 ng/h using osmotic minipumps (Alzet model 2002; Alza, Palo Alto, CA) implanted sc, and by feeding the rats a dilute preparation (1.0 kcal/ml) of liquid formula (AIN76; Bioserv, Frenchtown, NJ) for 7 d (27, 28). Rats fed with pelleted AIN-76 and allowed access to tap water ad libitum were used as normoosmolar controls. Rats infused with dDAVP at the same rate as the hypoosmolar rats, but fed AIN76 pelleted chow and allowed access to tap water ad libitum, were used as dDAVP-treated normoosmolar rats. To induce hypernatremia, rats were given 2% NaCl solution ad libitum as their only drinking fluid for 7d. The body weights (g), plasma Na+ levels (mM), and plasma osmolalities (mosmol/kg H2O) were measured in blood samples drawn via jugular puncture from each animal after 7 d of treatment and are shown in Table 1
.
|
Tissues
LMD of the SON.
All the rats were killed starting at 0900 h, by decapitation, and their brains were quickly removed, immediately frozen on dry ice, and stored at 80 C until further processing occurred. The tissue was placed in a cryostat for 10 min at the cutting temperature (18 C) for temperature equilibration, and 7-µm-thick coronal sections were cut at the SON level, placed on and thawed onto membrane-coated glass slides (glass foil PEN slides; Leica Microsystems Inc., Bannockburn, IL), and immediately placed in a slide box embedded in dry ice. The sections were stored at 80 C until they were used. Before LMD, the tissue was fixed and dehydrated with ethanol as described elsewhere (29). Briefly, the slides were thawed for 45 sec in 75% ethanol and further dehydrated by sequential immersion in 95%, 100%, and again with 100% ethanol for 5 sec each. Then, the slides were cleared twice with xylene for 2 min and dried in a vacuum chamber. All of the solutions used for fixation were prepared with diethylpyrocarbonate water. LMD was performed under dark-field illumination, using a Leica Laser Microdissection Microscope (Leica Microsystems Inc.) (30), immediately after dehydration of the slides. Brains from three animals per each treatment group were individually microdissected. The dissected SONs were collected into 0.5-ml tubes with 70 µl lysis buffer containing guanidine thiocyanate and 0.5 µl ß-mercaptoethanol.
Collection of hypothalamic reference tissue.
Blocks of hypothalamic tissue were obtained from 10 control male rats. After decapitation of the rats at 0900 h, the brains were removed from the skull and placed ventral-side-up on a rubber stopper. Coronal cuts were made rostral to the optic chiasm and caudal to the cerebral peduncle. The hypothalamus was removed from the resulting brain slices by making a cut at the top of the third ventricle and cuts at the lateral margins of the optic tracts. The tissue samples were frozen in liquid nitrogen and stored at 80 C until they were extracted.
RNA extraction
Laser-microdissected SON tissue.
RNA isolation was preformed according to the manufacturers protocol, with the Absolutely RNA Microprep Kit (Stratagene, La Jolla, CA) (31). After extraction, total RNA was measured using a Ribogreen RNA quantitation kit (Molecular Probes, Inc., Eugene, OR). The samples and the standard RNAs were excited at 485 nm, and the fluorescence emission intensity was measured at 535 nm using a fluorescence microplate reader (VICTOR 2 1420 Multilabel counter; Wallac Oy, Turku, Finland). Fluorescence emission intensity of the samples was then plotted against an RNA standard curve. The average total RNA per animal (bilateral SON) was 193.2 ng, 113.4 ng, and 90.6 ng for control, dDAVP-treated, and hypoosmolar animals, respectively. Equal amounts of total RNA were pooled from three rats in each treatment group, and 150 ng per group was used as the template for T7-based linear RNA amplification.
Reference hypothalamic tissue.
RNA extraction of the dissected hypothalamic blocks was done with Trizol (Life Technologies, Gaithersburg, MD) (32) followed by a DNaseI (GenHunter, Nashville, TN) treatment. The product was cleaned up using an Absolutely RNA Microprep Kit (Stratagene). Approximately 200 µg of total RNA were obtained from each block, and 5 µg RNA from each of 10 animals was pooled together, and 150 ng of the pool was amplified using T7-based linear RNA amplification. Thus, we used 150 ng of the pooled hypothalamic tissue RNA and the SON RNA in each reaction to obtain consistent amplification efficiency among all the samples.
T7-based RNA amplification
RNA amplification was performed according to the manufacturers protocol, using a RiboAmp RNA Amplification Kit (Arcturus, Mountain View, CA). The principles of this amplification method have been described previously (33). The first round of amplification was performed on 150 ng total RNA from the pooled hypothalamic reference and the LMD SON material. For the second round, 500 ng of antisense RNA (aRNA) was collected from each of the samples and used as template. The total amount of the RNA produced was measured with a spectrophometer (Ultrospec 2100 pro UV/Visible spectrophometer; Amersham Biosciences, Piscataway, NJ). The total amounts of RNA produced in the first-round amplification were 10.6, 6.6, 4.0, and 3 µg reference hypothalamic RNA, normoosmolar control SON, dDAVP-treated SON, and hypoosmolar SON, respectively. The total amounts of aRNAs from the second round amplifications were 138, 198, 168, and 180 µg for the hypothalamic reference, control SON, dDAVP-treated SON, and hypoosmolar SON, respectively. The 260/280 ratios for the RNA samples after the second round ranged from 2.22.4, and the spectra from OD230 to OD320 were those expected for pure RNA. The length of the aRNAs ranged from 300-1300 bp after the first round and from 300700 bp after the second round of amplification.
Microarray fabrication
Mouse cDNA microarrays were printed on poly-L-lysine-coated slides. The cDNA libraries that were used to print the array were provided by Dr. Bento Soares, University of Iowa (http://genome.uiowa.edu/projects/BMAP/) (adult whole-brain cDNA library) and Dr. Minoru Ko, National Institute on Aging, NIH (http://lgsun.grc.nia.nih.gov/cDNA/cDNA.html) (embryonic brain cDNA library). Plasmids were extracted from the bacteria using QiaPrep Turbo kits (Qiagen, Valencia, CA) and a BioRobot 8000 (Qiagen). The cDNA inserts were amplified with modified M13 primers (M13F 5'-GTTGTAAAACGACGGCCAGTG-3' and M13R 5'-CACACAGGAAACAGCTATG-3') and purified with MultiScreen PCR plates (Millipore, Bedford, MA). The PCR products were diluted in 50% dimethylsulfoxide to an average concentration of 200 ng/µl. These products (5 µl each) were transferred to 384-well plates (Genetix, St. James, NY) and printed using an OmniGrid arrayer (GeneMachines, San Carlos, CA). The printed slides were aged for a week and then postprocessed before hybridization. Detailed descriptions of these procedures can be viewed at http://cmgm.stanford.edu/pbrown/mguide/index.html. To validate the dissection of the SON and to confirm the response of the SON neurons to the physiological manipulations studied, we added rat VP and OT cDNAs to the arrays.
Microarray properties
The 35,319 elements printed include 11,720 product-defined clones and 23,599 product undefined clones. The number of unigene clusters represented is 26,000. In a preliminary study, we found that cross-hybridization of mouse- and rat hypothalamic RNAs on this array is 94%, indicating that it is appropriate for gene expression analysis of the rat hypothalamus (26).
Probe labeling with amine-modified random primers
Probes were synthesized from 2 µg amplified RNA. The SON was labeled with Cy-5, and the reference (whole hypothalamus) was labeled with Cy-3. The labeling was performed as described previously (34, 35) with minor modifications. Briefly, the RNA was combined with 4 µg amine-modified random primer (amine-C6-TNNNNNN; Sigma Genosys, The Woodlands, TX) and 5 U ribonuclease inhibitor (RNAsin; Promega, Madison, WI) in a total vol of 18.5 µl, incubated at 70 C for 10 min, and chilled on ice for 10 min. The primer/RNA solution was then added to 6 µl of 5x first-strand buffer (Life Technologies), 0.6 µl of 50x aminoallyl deoxy (d) UTP/dNTPs [25 mM dATP, dGTP, and dCTP; 15 mM dTTP; and 10 mM aminoallyl dUTP (Sigma, St. Louis, MO)], 3 µl 0.1-M dithiothreitol, and 2 µl SuperScript II reverse transcriptase (Life Technologies) and incubated at 42 C for 2 h. The reaction was terminated with 10 µl 0.5-M EDTA, and the RNA was hydrolyzed with 10 µl 1-N NaOH at 65 C for 30 min. The solution was neutralized with 10 µl 1-M HCl, and a MinElute PCR purification kit (Qiagen) was used to purify the products. The samples were concentrated to 9 µl in a vacuum centrifuge, and then 1 µl 1-M sodium bicarbonate (pH 9.3), was added to the cDNA solution, followed by 4.5 µl dye solution [NHS-ester Cy3 or Cy5 (Amersham Biosciences), 62.5 µg/µl in dimethylsulfoxide]. The resulting solution was mixed, by pipeting it up and down several times, and incubated at room temperature for 1 h in the dark. The labeling reaction was stopped with 4.5 µl 4-M hydroxylamine hydrochloride (Sigma). The contents of the tube were mixed, briefly centrifuged, and incubated for 30 min at room temperature in the dark. The probes were purified using a QIAquick PCR purification kit (Qiagen). The products were concentrated to 17 µl in a vacuum centrifuge. Then, 4.5 µl of 20x saline sodium citrate (SSC), 2 µl of poly (A) (A60mer, 10 mg/ml; Sigma Genosys), 1 µl human Cot-1 DNA (10 mg/ml; Life Technologies), and 1 µl yeast tRNA (4 mg/ml; Life Technologies) were added, and the probes were denatured at 98 C for 2 min. The arrays were prehybridized in 5x SSC, 0.1% sodium dodecyl sulfate (SDS), 1% BSA solution at 42 C for 1 h, washed in H2O for 2 min, rinsed in isopropanol, and centrifuged at 800 rpm for 2 min to dry them. The denatured probes were combined with 20 µl of 2x hybridization buffer (50% formamide, 10x SSC, 0.2% SDS). The hybridization solution was pipeted onto the array, cover slips were applied, and the slides were placed in a hybridization chamber (Corning, Corning, NY). They were incubated in a 42-C water bath for 16 h, the cover slips were removed, and the arrays were washed in 2x SSC plus 0.1% SDS, in 0.5x SSC plus 0.01% SDS, and 0.06x SSC for 5 min each. The slides were centrifuged at 800 rpm for 2 min to dry them before scanning. Dye swapping was not performed in our analysis because we previously established that the modified indirect labeling method used here with amine-modified random primer did not have dye bias (34). In addition, we performed comparisons by hybridizing each of our treatment group samples against a reference sample, and we analyzed the fold changes of the expression ratio for each gene. We always used the same dyes on the reference and treatment groups, consistent with reference-designed array studies where a reverse labeling, to exclude dye bias, is not necessary (36, 37).
Array scanning and data analysis
The arrays were scanned with a GenePix 4000A scanner (Axon, Foster City, CA) at 10-µm resolution. The photomultiplier tube (PMT) voltage settings were varied to obtain the maximum signal intensities with less than 1% probe saturation. The color images were formed by assigning the SON intensity in red and the hypothalamic reference intensity in green (see Fig. 3
). The resulting images were analyzed using IPLab (Scanalytics, Fairfax, VA) and ArraySuite (National Human Genome Research Institute, NIH, Bethesda, MD) software, and the ratios of the red over the green intensity for all targets were determined. Calibrated ratios were obtained by a normalization method based on the ratio statistics (38, 39). To determine the reliability of each ratio measurement, a set of quality indicators were used: 1) association of a sufficiently large numbers of pixels with the element; 2) flat local background; 3) uniform signal consistency within the target area; and 4) unsaturation of the majority of the signal pixels. Based on these indicators, a quality rank was calculated ranging from 1 to 0, and genes with quality rank scores less than 0.1 were excluded from our analysis. A detailed description of this procedure is provided elsewhere (38, 39). Also, genes with intensities lower than 250 [4 x (the average background + 3 SD)] of the arrays in this experiment) in the red (SON) channel were excluded from the analysis. The labeled control SON samples were hybridized in triplicate, and the labeled dDAVP-treated SON and hypoosmolar SON samples were hybridized in quadruplicate. In summary, we used three arrays for the control and four arrays each for the dDAVP-treated and sustained-hypoosmolar conditions. The control arrays were done in triplicate, and the dDAVP-treated and hypoosmolar were done in quadruplicate. Replicates are defined as hybridization replicates. We used three animals per treatment, and the samples were pooled before amplification. Statistical analysis to compare the three experimental groups was performed by ANOVA using mAdb program (CIT/BMAS, NIH). A 95% confidence interval was used throughout the experiments to detect differentially expressed genes.
|
In situ hybridization histochemistry (ISHH)
In this study, we used a quantitative ISHH protocol, described elsewhere (41), with minor variations. The rat heteronuclear (hn) VP probe (kindly provided by Dr. Thomas Sherman, Georgetown University, Washington, D.C.) was a 735-bp fragment of intron 1 of the rat VP gene subcloned into pGEM-3 vector (Promega) (42). T7 and SP6 primers were used to PCR-amplify the fragment, and the resulting PCR product was used as a template for riboprobe synthesis. Some plasmids that contained selected expressed clones on the array were studied further by ISHH. First we sequenced the plasmid to confirm the annotation. Then, the plasmids were PCR-amplified using either T7 and T3 primers or a gene-specific primer sequence with the T7 or T3 recognition sequence on the 5' end. See Table 2
for PCR primer designs, lengths, and encompassing regions for these clones. The PCR products were used to prepare both the sense and the antisense probes ranging in size from 500650 bp. Hybridization of the sense probes was performed as negative control. Riboprobe synthesis was performed using 3040 ng of PCR product, 50 µCi of [
-35S]-uridine 5'-triphosphate (PerkinElmer Life Sciences, Inc., Boston, MA), and 10 mM dithiothreitol along with the reagents in the MAXIscript in vitro transcription kit (Ambion, Inc., Austin, TX). Serial 10-µm brain sections were cut in a cryostat, placed onto poly-L-lysine-coated slides (Fisher Scientific Company, Newark, DE), dried on a slide warmer for 1030 min at 37 C, and stored at 80 C. Before hybridization, the sections were fixed in 4% formaldehyde for 10 min at room temperature, rinsed once and washed twice for 5 min in 1x PBS, put into 0.1 M triethanolamine-HCl (pH 8.0) containing 0.25% acetic anhydride for 10min at room temperature, rinsed with 2x SSC buffer, transferred through graded ethanol (75100%), and air-dried. Hybridization was carried out in 80 µl hybridization solution (20 mM Tris-Cl, pH 7.4; 1 mM EDTA, pH 8.0; 300 mM NaCl; 50% formamide; 10% dextran sulfate; 1x Denhardts solution; 100 µg/ml salmon sperm DNA; 250 µg/ml yeast total RNA; 250 µg/ml yeast tRNA; 0.0625% SDS; 0.0625% sodium thiosulfate) containing 106 cpm denatured S35-labeled riboprobe. After an overnight incubation at 55 C, the sections were washed 4 times in 4x SSC, incubated in TNE buffer [10 mM Tris-Cl, pH 8.0; 0.5 M NaCl; 0.25 mM EDTA, pH8.0] containing 20 µg/ml ribonuclease A, for 30 min at 37 C, and then washed twice in 2x SSC and twice in 0.1x SSC at 65 C. The sections were rinsed in graded ethanol solutions and then air-dried. Finally, the sections were apposed to a low-energy storage phosphor screen (Amersham Biosciences) for 114 d and developed using a phosphor imager (Storm 860, Amersham Biosciences). To evaluate the levels of mRNA or hn RNA in the SONs (42), the average densities and unit areas per SON of phosphor screen were measured in the sections from each rat bilaterally, using the Image Quant software version 5.2 (Amersham Biosciences). Statistical significance of differences between groups was determined by one-way ANOVA followed by Fishers protected least-significant-difference test or Students test. Differences between groups were considered statistically significant at P < 0.05. Experiments were repeated on four animals, and results are expressed in mean ± SEM.
|
| Results |
|---|
|
|
|---|
VP transcription levels after osmotic perturbation
We used an intronic VP probe for ISHH to measure hn VP RNA as an index of the transcription of VP in the SON (42) under the four conditions shown in Table 1
. Figure 1
compares the effect of hyperosmolality (Fig. 1B
), dDAVP treatment without hypoosmolality (Fig. 1C
), and dDAVP treatment with hypoosmolality (Fig. 1D
) to the control VP hn RNA expression (Fig. 1A
) in the rat SON. Quantitative analysis of the hn VP RNA levels showed a 238 ± 9.9% increase in VP hn RNA in the hyperosmolar rats, a fall to 20 ± 6.1% in the hypoosmolar rats, and no significant change in the dDAVP-treated normoosmolar rats compared with control animals (Fig. 2
). Thus, our physiological treatments affected VP expression just as one might have expected based on earlier reports (22, 42, 43).
|
|
We also performed a MDS analysis, which represents the correlation of all the data points between both the replicates in the same treatment group and different treatment groups in terms of their position in three-dimensional Euclidian spaces (40). The MDS analysis (Fig. 4
) showed a good correlation between replicates in the same treatment group, with each of the treatment groups falling into a significant well-defined cluster. As expected, the control and hypoosmolar groups fell into two separate clusters, which are far apart from each other. Surprisingly, the dDAVP-treated group, which was similar in plasma osmolality (Table 1
) and VP hn RNA expression level (Fig. 2
) to the control group, fell into a distinct cluster residing in between that of the control and hypoosmolar groups, suggesting that there was a significant pharmacological effect of the dDAVP on gene expression in the SON (see Discussion). Overall, the MDS data show that the expression ratio data derived from the arrays are highly reproducible within the same treatment groups.
|
|
|
3.4 as a measure of preferential gene expression in MCNs (see Ref.26 for justification of this criterion); and 2) use of a 2-fold change in expression of specific genes in SONs under normosmolar vs. hypoosmolar conditions, to identify the most important gene expression changes. Based on criterion 2, we found 1564 genes that significantly changed expression (Tables 4
|
|
3.4) in the SON. These include the tyrosine hydroxylase mRNA, which fell more in response to hypoosmolality than any other transcript that is preferentially expressed in the SON (Table 4
Transcription/translation-related genes modified in expression during hyponatremia
We were especially interested in identifying genes that might regulate transcription and translation in the MCNs of hyponatremic animals, so we specifically searched for genes that were annotated as transcription/translation-related genes using either the Gene Ontology program (45) (see website; http://cgap.nci.nih.gov/Genes/GOBrowser), or directly from the scientific literature. Table 6
lists 15 transcription/translation-related genes that were down-regulated more than 2-fold in hypoosmolar vs. control rats. PIPPIN, an RNA binding protein that functions in protein translation (46, 47); and putative homeodomain transcription factor, two genes which were not previously known to be expressed in the SON (48, 49); and c-fos, a marker of neuronal activity, were the most down-regulated of the transcription/translation-related genes in the hypoosmolar group compared with the controls (Table 6
). Table 7
lists 29 transcription/translation-related genes that were up-regulated more than 2-fold in the hypoosmolar rats. Interestingly, there were many more transcription/translation-related genes that were up-regulated between 2-fold and 3-fold under hypoosmolar conditions compared with down-regulated genes.
|
|
| Discussion |
|---|
|
|
|---|
The hypoosmolar rat model
The hypoosmolar condition in this model was induced by an infusion of the VP V2 receptor agonist dDAVP in association with water loading by a liquid diet. Therefore, in this study, we employed a second control consisting of an animal that was infused with the same amount of dDAVP (dDAVP-treated) as the hypoosmolar animals but was fed solid chow. These non-water-loaded rats remained normoosmolar despite the dDAVP infusion (28). This control allowed us to look for genes that responded solely to the infusion of dDAVP. The MDS analysis (Fig. 4
) shows that each of our treatment groups fell into independent defined clusters. This suggests that the dDAVP treatment itself did influence gene expression in the SON. Throughout this study, when we identified genes in the SON that changed between the control and the hypoosmolar conditions, we also determined whether these genes significantly changed between the control and the dDAVP-treated normoosmolar conditions. We found that virtually none of these genes overlapped. Because dDAVP does not appreciably cross the blood brain barrier (52, 53), and the V2 receptor is not present in the SON (54, 55), these data suggest the possibility of an indirect action of the dDAVP from the periphery. In any case, all of the changes observed were relatively small, and we did not observe a statistically significant change between the control and the dDAVP-treated normoosmolar condition for VP transcription (Fig. 2
). For the novel genes we analyzed in this study, virtually all of the genes that failed to show significant changes between the control and the dDAVP treatment on the array gave similar results in the ISHH analysis.
To confirm that the physiological conditions we used succeeded in altering VP gene transcription in the SON, we first performed ISHH using an exonic VP probe. VP mRNA showed a 166% increase in the hyperosmolar rat SON, a 59% decrease in the hypoosmolar rat SON, and no significant change in the dDAVP-treated normoosmolar rat SONs in comparison with control SONs (data not shown). A more direct estimate of VP gene transcription was made by using an intronic probe for hn VP RNA, which is unaffected by cytoplasmic mRNA degradation and turnover (42). The resulting data are shown in Figs. 1
and 2
, and illustrate that the experimental conditions used appropriately altered VP transcription.
SON genes regulated by osmolality
In a recent microarray study (13), change in gene expression during chronic dehydration was used as a criterion to identify functionally interesting genes in the SON. Using hand-dissection of the SON and an array containing 1152 gene sequences, nine genes regulated by dehydration were identified. Four of these genes were also represented on our DNA array. Of these, only IL-6 (shown in Supplemental Table 1S) had a greater-than-2-fold decrease in expression during sustained hypoosmolality. The other three genes, eukaryotic translation initiation factor 5A, showed significant changes but did not meet our criterion of more than 2-fold change; protein kinase-AMP-activated, ß2 noncatalytic subunit, and PI-3-kinase-related kinase SMG-1 did not show significant changes between the control and hypoosmolar rats.
We performed ISHH on several of the genes that were identified as having very high expression ratios, all of which were also robustly functionally regulated (Table 3
). Our false-positive rates were 0% for criterion 1 and 20% for criterion 2. Of particular interest are C1q domain containing 1, rho GDI ß, and encephalopsin because of their very large changes in gene expression in response to osmotic perturbations in both directions. All of these genes decreased in expression in the SON in the hypoosmolar state. C1q domain containing 1 (also known as EEG-1) was recently identified as a novel growth-related gene involved in hematopoetic differentiation (56). The fact that this genes expression is suppressed in the hypoosmolar condition suggests that it may also be involved in regulation of the VP and/or OT MCNs. The rho GTI ß rho GDI regulates the GTP-bound and GDP-bound state cycle of rho GTP-binding protein by decreasing the rate of dissociation from rho GTPases, which play important roles in neuronal morphogenesis (57). Previous results from our laboratory showed that MCNs dramatically adjust their cell volumes during both hyper- and hypoosmolar conditions (24). It is possible that the rho GDI may be involved in these morphological transformations.
Encephalopsin (also called Panopsin) is a member of the rhodopsin/G protein-coupled receptor gene superfamily. It is specifically expressed in the mammalian brain (58, 59). In this study, we used the rat genomic sequence that corresponded to the region (3'UTR sequence of the mouse encephalopsin) spotted on the array to produce a probe for ISHH. The ISHH showed a strong hybridization in the SON, paraventricular nucleus, and subfornical region in the rat brain (data not shown), which differed from a previous ISHH study on mouse encephalopsin. This difference could be due to an unknown splice variant in this gene. In our study, both the SON and the subfornical region showed a prominent increase and decrease in expression during the hyperosmolar and hypoosmolar states.
Genes involved in transcriptional regulation during sustained hypoosmolality that underwent 2-fold or greater changes are shown in Tables 6
and 7
. In Table 3
, we show the results from both ISHH and array assays for PIPPIN and putative homeodomain transcription factor (PHTF1). PIPPIN is a brain-specific RNA binding protein in the rat, which controls the recruitment of mRNA to the translational machinery (46, 47). PHTF1 is a putative homeobox gene that is well conserved not only in vertebrates but also in Drosophila (48, 49). Although this gene is ubiquitously expressed in the brain, there is a possibility that it contributes to the transcriptional regulation of the VP and/or OT genes, because no changes were observed in other regions of the brain under hyper- and hypoosmolar conditions. Calreticulin is a multifunctional protein that acts as a major Ca binding protein in the lumen of the endoplasmic reticulum. It is also located in the nucleus, interacts with DNA binding domains of estrogen receptor ß, inhibits transcriptional activities (60), and is able to act as a modulator of gene transcription. The decrease of the calreticulin mRNA expression in the SON during hypoosmolar conditions (Table 4
) may be related to the reported increase in ERß under these conditions (21).
Another transfactor of interest is the LMO-4 gene, a novel member of the LMO subfamily of LIM domain containing transcription factors (61). It dramatically increased in expression under hypoosmolar conditions (Tables 3
and 7
). The reported functions of this gene are the inhibition of differentiation in normal cells in the tumoriogenesis of breast cancers and T cell leukemia by interacting with DNA binding transcription factors or cofactors (62, 63), and also the inhibition of neuritogenesis in neuroblastoma cells (64). In a recent study, target disruption of this gene in mice caused a defect in the neural tube development (65, 66). The ISHH results of LMO-4 shown in Fig. 5
confirmed the array results showing up-regulation of expression in the hypoosmolar condition. Interestingly, LMO-4 is barely expressed in the SON in control and dDAVP-treated rats, but is substantially up-regulated in both hyper- and hypoosmolar animals, in contrast to most other genes, which showed a pattern of opposite regulation during these disparate physiological conditions. One of the functions of LIM domain is to mediate protein-protein interaction, which may have either positive or negative effects on transcription, depending on the counterpart with which it reacts (67, 68). Further studies should be directed to find the transcription factors and cofactors interacting with the LMO-4 gene in the SON and to determine the specific transcriptional regulation mechanism.
Three genes with prominent preferential expression in the SON were borderline, with respect to meeting the criterion of a greater-than-2-fold change in gene expression under hypoosmolar conditions on the array. These are EST similar to FLJ20037(69), zinc finger protein 312, and guanine nucleotide binding protein
stimulating (previously described in Ref.18), and each underwent significant changes in expression in both hypoosmolar rats when evaluated by ISHH analysis (Table 7
). Zinc finger protein 312 (also known as forebrain embryonic zinc finger, Fez), containing six C2H2 zinc fingers, is a highly conserved gene (70, 71, 72) and is of particular interest. This gene had the highest expression ratio among all the transcription factors expressed in the SON found on the array. Its only reported function, to date, relates to the development of the forebrain (72, 73), but its preferential expression in the SON suggests that further study of this gene in relation to VP and OT gene expression in the adult is warranted. Both zinc finger protein 312 (Fez) and LMO-4 gene are novel transfactors identified in the SON in this study, and they may also participate in regulating OT- and VP-gene expression in the SON, and other specific properties of the MCNs.
Conclusions
We found that hypoosmolality, known to be associated with a profound down-regulation of both OT and VP gene expression, was also accompanied by both up- and down-regulation of a large number of genes in the SON. A significant number of these genes were also regulated by hyperosmolality, suggesting that the changes observed were a result of true osmotic regulation rather than due to nonspecific effects, e.g. stress, or secondary treatment effects such as weight loss and others. Many previous studies have indicated that hypoosmolality inhibits both electrical activity (74) and peptide synthesis (11) in MCNs and, most remarkably, that the MCNs decrease both cellular and nuclear volume by 3040% during sustained hypoosmolar conditions (24). The latter finding is consistent with the view that hypoosmolality produces a global decrease in transcriptional and translational activity in these neurons. Hence, our finding of decreases in expression of a large number of genes present on the array was expected. However, the finding that even more genes increased in expression under conditions of hypoosmolality was surprising. This finding that many genes are up-regulated in the SON during hypoosmolality raises the interesting possibility that these genes participate in the dramatic shut-off of peptide and structural protein synthesis in the SON, to maintain the MCNs in a quiescent state. The identification of a large number of transcription factor genes in the SON that are osmotically regulated (Tables 47![]()
![]()
![]()
) provides us with a group of candidate genes that might control OT and VP transcription, as well as other properties of the MCN phenotypes. The complex and global nature of the regulation of a cellular phenotype is not unprecedented. In a recent study, Odom et al. (75) reported that a member of the hepatocyte nuclear family of transcription factors functioned as a master regulator of global hepatocyte and pancreatic islet transcription and function. Another study, using microarrays, identified sets of known and novel genes that regulated the development of specific cellular phenotypes in the endocrine pancreas (76). It is also possible that there are sets of so-called master genes that control the global regulation of gene transcription in the MCNs during their adaptation to sustained osmotic perturbations. A general mechanism that could be involved in the global transcriptional activation and inactivation in the MCNs is chromatin remodeling. Posttranslational modification of core histones appears to be generally involved in regulating transcriptional activity (77, 78, 79), and one study has shown that chromatin remodeling occurs in the suprachiasmatic nucleus in response to a physiological stimulus in vivo (80). Future studies should be directed at the relationship of specific gene expression and chromatin remodeling in MCNs in the SON during their adaptation to sustained osmotic challenges.
| Note Added in Proof |
|---|
|
|
|---|
| Acknowledgments |
|---|
| Footnotes |
|---|
First Published Online December 9, 2004
Abbreviations: aRNA, Antisense RNA; dDAVP, 1-desamino-[8-D-arginine]-VP; dNTP, deoxynucleotide 5'-triphosphate; dTTP, deoxythymidine 5'-triphosphate; dUTP, deoxyuridine 5'-triphosphate; EST, expressed sequence tag; GDI, GDP dissociation inhibitor; hn, heteronuclear; HNS, hypothalamo-neurohypophysial system; ISHH, in situ hybridization histochemistry; LMD, laser microdissection; LMO, LIM-only; MCN, magnocellular neuron; MDS, multidimensional scaling; OT, oxytocin; PHTF, putative homeodomain transcription factor; SDS, sodium dodecyl sulfate; SON, supraoptic nucleus; SSC, saline sodium citrate; VP, vasopressin.
Received September 10, 2004.
Accepted for publication November 29, 2004.
| References |
|---|
|
|
|---|
signaling. J Biochem (Tokyo) 134:315319This article has been cited by other articles:
![]() |
J. Blechman, N. Borodovsky, M. Eisenberg, H. Nabel-Rosen, J. Grimm, and G. Levkowitz Specification of hypothalamic neurons by dual regulation of the homeodomain protein Orthopedia Development, December 15, 2007; 134(24): 4417 - 4426. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Rusnak, Z. E. Toth, S. B. House, and H. Gainer Depolarization and Neurotransmitter Regulation of Vasopressin Gene Expression in the Rat Suprachiasmatic Nucleus In Vitro J. Neurosci., January 3, 2007; 27(1): 141 - 151. [Abstract] [Full Text] [PDF] |
||||
![]() |
H.-J. Lee, M. Palkovits, and W. S. Young III From the Cover: miR-7b, a microRNA up-regulated in the hypothalamus after chronic hyperosmolar stimulation, inhibits Fos translation PNAS, October 17, 2006; 103(42): 15669 - 15674. [Abstract] [Full Text] [PDF] |
||||
![]() |
J. B. Uney and S. L. Lightman MicroRNAs and osmotic regulation PNAS, October 17, 2006; 103(42): 15278 - 15279. [Full Text] [PDF] |
||||
![]() |
C. Hindmarch, S. Yao, G. Beighton, J. Paton, and D. Murphy A comprehensive description of the transcriptome of the hypothalamoneurohypophyseal system in euhydrated and dehydrated rats PNAS, January 31, 2006; 103(5): 1609 - 1614. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. T. Ghorbel, G. Sharman, C. Hindmarch, K. G. Becker, T. Barrett, and D. Murphy Microarray screening of suppression subtractive hybridization-PCR cDNA libraries identifies novel RNAs regulated by dehydration in the rat supraoptic nucleus Physiol Genomics, January 12, 2006; 24(2): 163 - 172. [Abstract] [Full Text] [PDF] |
||||
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
| Endocrinology | Endocrine Reviews | J. Clin. End. & Metab. |
| Molecular Endocrinology | Recent Prog. Horm. Res. | All Endocrine Journals |